On 2021-11-21, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #300
Metagenomic Analysis
- data_manager_build_bracken_database was updated to fd5830f88314
- malt_run was updated to d505990b8c89
Annotation
- prokka was updated to 8a22554cdde2
- funannotate_annotate was updated to 78407487f758
- funannotate_clean was updated to 6298bb90475b
- funannotate_clean was updated to a5fb32298903
- funannotate_compare was updated to e2e43248dd18
- funannotate_predict was updated to 1a59958c1f76
- funannotate_predict was updated to 73909ee8162e
- funannotate_sort was updated to 4309c6eeb911
- orthofinder_onlygroups was updated to 904fb55e9156
- spaln was updated to dd0cd2319ae5
- tetyper was updated to edcf603bedfd
Send Data
- ena_upload was updated to 4aab5ae907b6
Variant Calling
- king was updated to ec2bc87ebd7b
- vardict_java was updated to d262577e04b0
Nanopore
- medaka_consensus was updated to b2aae698b9d3
- medaka_consensus_pipeline was updated to 72b5e9dda577
- medaka_variant was updated to 222669c4afb6
- medaka_variant_pipeline was updated to 3fbefde449bc
Graph/Display Data
- charts was updated to 344ac3ca7557
- circos was updated to 31a35811dda6
Convert Formats
- crossmap_vcf was updated to 6e96c77f5824
Assembly
- abyss was updated to 553bfe8bd0b5
- pretext_map was updated to 2b16ba799da9
Mapping
- minimap2 was updated to c0c2d0941de8
RNA Analysis
- deseq2 was updated to 7ff33c2d525b
FASTA/FASTQ
- umi_tools_count was updated to a535cf1e5da4
- umi_tools_dedup was updated to f1d33e4c7bd8
- umi_tools_extract was updated to f3759eec3018
- umi_tools_group was updated to d6255614afd7
- umi_tools_whitelist was updated to 953b4821b183
Phylogenetics
- nextalign was updated to 46b4fa689fd7
- nextclade was updated to d070e316da5d
- pangolin was updated to 83a69484cb87
None
- data_manager_funannotate was updated to 0cadd0a04412
- data_manager_interproscan was updated to 0db4f153d86d
- data_manager_malt_index_builder was updated to 5f9d6aee2256
Proteomics
- openms_openpepxl was updated to 40cc19c0dbd6
- openms_openpepxl was updated to a2a842b00f9c
- openms_openpepxl was updated to fc36cfd19834
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
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