On 2022-10-16, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #353
Proteomics
- openms_openpepxl was updated to a2a842b00f9c
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
ChemicalToolBox
- alphafold2 was updated to c0e71cb2bd1b
Annotation
- netboxr was updated to 785ed8621503
- integron_finder was updated to 1ae00120dd24
- miniprot_index was updated to d6a874226260
- plasmidfinder was updated to e23b96d79dc0
- red was updated to 18a46265455b
Metagenomic Analysis
- polypolish was updated to aaa868913641
- semibin was updated to 7b382efabb98
- semibin_bin was updated to 474701f91bcd
- semibin_concatenate_fasta was updated to dcc81bfe5f6a
- semibin_generate_cannot_links was updated to 078414a1226b
- semibin_generate_sequence_features was updated to 07bf5268724f
- semibin_train was updated to 08cc1cd58f38
Nanopore
- medaka_consensus was updated to 682d1e2c8be4
- medaka_consensus_pipeline was updated to 79e9a869f40e
- medaka_variant was updated to ec699520444c
RNA Analysis
- cemitool was updated to 3f9ff31c88bb
FASTA/FASTQ
- cutadapt was updated to 135b80fb1ac2
Assembly
- getorganelle was updated to 8b330a577046
- hapog was updated to c61bc8bb5f1e
- ragtag was updated to b3c3217c0cbc
None
- data_manager_semibin was updated to 676915c44e1e
Phylogenetics
- pangolin was updated to ca337cce3888
Imaging
- cell_intensity_processing was updated to 7a77ed0e579a
- gate_finder was updated to 6df8d6e42152
- mesmer was updated to 53240d7c1fc5
- rename_tiff_channels was updated to 09e240a12897
- squidpy was updated to be0e7952e229
- vitessce_spatial was updated to 9f60ef2d586e
- spyboat was updated to 8815bc7e9cef
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