On 2023-01-15, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #368
Biodiversity data exploration
- obisindicators was updated to 1015a0070bac
Annotation
- bakta was updated to da5f1924bb2e
- busco was updated to bb935709506a
- goseq was updated to 602de62d995b
Variant Calling
- bcftools_annotate was updated to 3f62d4939d54
- bcftools_call was updated to f0d44631365f
- bcftools_cnv was updated to 6d35a3780bfd
- bcftools_concat was updated to 08296952d12f
- bcftools_consensus was updated to 147de996e34f
- bcftools_convert_from_vcf was updated to cacc9970727a
- bcftools_convert_to_vcf was updated to 4935320a59a8
- bcftools_csq was updated to f01b2c9506b9
- bcftools_filter was updated to 656a916779fe
- bcftools_gtcheck was updated to 3eac729e66c9
- bcftools_isec was updated to 63aabc920911
- bcftools_merge was updated to af163c712539
- bcftools_mpileup was updated to 03191140c66a
- bcftools_norm was updated to ebb2e12a6de1
- bcftools_plugin_color_chrs was updated to 36960e552ddc
- bcftools_plugin_frameshifts was updated to 399b40b2bcab
- bcftools_plugin_setgt was updated to 262bba5b90ef
- bcftools_plugin_split_vep was updated to d55feecb6dc1
- bcftools_query was updated to a850902cac64
- bcftools_reheader was updated to 8057cf55fa41
- bcftools_roh was updated to bdc67eeb0bc9
- bcftools_stats was updated to a2f8dc22d7c0
- bcftools_view was updated to abc3ced31cd1
- ucsc_fatovcf was updated to 78df8fc2b3ab
Proteomics
- openms_openpepxl was updated to 40cc19c0dbd6
- openms_openpepxl was updated to a2a842b00f9c
- openms_openpepxl was updated to fc36cfd19834
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
Assembly
- cactus_cactus was updated to a74dbfee5a86
- cactus_export was updated to aaa0d6a8b808
HiCExplorer
- hicexplorer_chicaggregatestatistic was updated to 1eae6fe69bbd
- hicexplorer_chicdifferentialtest was updated to 9d878ac82c0f
- hicexplorer_chicplotviewpoint was updated to 43c24d0bd463
- hicexplorer_chicqualitycontrol was updated to fadd03fbc4f5
- hicexplorer_chicsignificantinteractions was updated to 6ef732512682
- hicexplorer_chicviewpoint was updated to fdcf45efac66
- hicexplorer_chicviewpointbackgroundmodel was updated to b285586b61a6
- hicexplorer_hicadjustmatrix was updated to aeacaf08bd52
- hicexplorer_hicaggregatecontacts was updated to e30485c5e93b
- hicexplorer_hicaverageregions was updated to b15d27c440fd
- hicexplorer_hicbuildmatrix was updated to 29f66c353bcb
- hicexplorer_hiccomparematrices was updated to 826a6ac07f93
- hicexplorer_hiccompartmentspolarization was updated to bd6e26c47853
- hicexplorer_hicconvertformat was updated to 2a24ce221cd7
- hicexplorer_hiccorrectmatrix was updated to f5a37c3906cc
- hicexplorer_hiccorrelate was updated to bab2fa7355d9
- hicexplorer_hicdetectloops was updated to 0d6c2ff54c76
- hicexplorer_hicdifferentialtad was updated to 608538d083a2
- hicexplorer_hicfindrestrictionsites was updated to aa829050d061
- hicexplorer_hicfindtads was updated to 5746d61f0a91
- hicexplorer_hichyperoptdetectloops was updated to 89fb1aab755b
- hicexplorer_hicinfo was updated to 782e3ae92bc6
- hicexplorer_hicmergedomains was updated to 6f725a516914
- hicexplorer_hicmergeloops was updated to 420868438a99
- hicexplorer_hicmergematrixbins was updated to 4d511437b1e5
- hicexplorer_hicnormalize was updated to 8ad23dfdaabb
- hicexplorer_hicpca was updated to 41dbf4d162a2
- hicexplorer_hicplotaverageregions was updated to f490a6409f3d
- hicexplorer_hicplotdistvscounts was updated to a4a413dcc59d
- hicexplorer_hicplotmatrix was updated to 9939786dd9c9
- hicexplorer_hicplotsvl was updated to 279fb179dae7
- hicexplorer_hicplotviewpoint was updated to 7cdc1a2de16e
- hicexplorer_hicquickqc was updated to 7679948176ef
- hicexplorer_hicsummatrices was updated to 2a57fc28ef3a
- hicexplorer_hictransform was updated to 21b3ef2a6a80
- hicexplorer_hicvalidatelocations was updated to 0ecdd41d707c
Machine Learning
- virhunter was updated to 302332b914ef
Metagenomic Analysis
- krakentools_alpha_diversity was updated to e400e5ef0e7c
- krakentools_beta_diversity was updated to fc2077c654fb
- krakentools_kreport2krona was updated to bc508fe30940
SAM/BAM
- bamtools was updated to ddb22028b552
- bamtools_filter was updated to 108db6635177
- bamtools_split was updated to 96c9315b0e29
- bamtools_split_mapped was updated to 6dbef7ea2253
- bamtools_split_paired was updated to 5325e44297b9
- bamtools_split_ref was updated to 9b520009db81
- bamtools_split_tag was updated to e30af4e78cd3
Virology
- ivar_consensus was updated to 3e4f434a69c6
- ivar_filtervariants was updated to 72ddd32392cd
- ivar_removereads was updated to 7f1cfa4c0e32
- ivar_trim was updated to e3bb03cf207a
- ivar_variants was updated to 38b91a3190cd
Apollo
- apollo_create_account was updated to 1a2404ca43f9
- apollo_create_or_update was updated to 3d693b93991f
- apollo_delete_features was updated to f8d6315223d8
- apollo_delete_organism was updated to 8f4c1d40e893
- apollo_export was updated to f6e09a37bc8b
- apollo_feat_from_gff3 was updated to 250745643de2
- apollo_fetch_jbrowse was updated to d91f4bc313d3
- apollo_iframe was updated to 300a6bebd790
- apollo_list_organism was updated to 8dc690130172
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