On 2023-03-20, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #377
Biodiversity data exploration
- cb_dissim was updated to 7e6cc3da1189
- cb_dissim was updated to 8dc082da41c1
- cb_div was updated to 5b31641e6d30
- cb_ivr was updated to 8c6142630659
- cb_ivr was updated to bcbad4f83dec
Graph/Display Data
- ggplot2_heatmap2 was updated to 53460afd5115
Compute indicators for turnover boulders fields
- cb_dissim was updated to 8dc082da41c1
- cb_ivr was updated to bcbad4f83dec
- champ_blocs was updated to 936f52182427
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
Mapping
- rgrnastar was updated to c7c55b694974
- rna_starsolo was updated to b8f5f6e87f5c
RNA Analysis
- rseqc was updated to f242ee103277
Epigenetics
- hicup2juicer was updated to b4e7244246e2
- hicup_deduplicator was updated to 2107c2f7a5d7
- hicup_digester was updated to e79c38f1752c
- hicup_filter was updated to 2d4a34c00c67
- hicup_hicup was updated to 68fb19094f84
- hicup_mapper was updated to be104dee2833
- hicup_truncater was updated to cc413be789ea
- cooler_balance was updated to 8f71aaf6e59d
- cooler_cload_tabix was updated to 3ff6eeca667e
- cooler_csort_tabix was updated to d56db0e1555d
- cooler_makebins was updated to c3dc51297bf8
Proteomics
- openms_openpepxl was updated to 40cc19c0dbd6
- openms_openpepxl was updated to a2a842b00f9c
- openms_openpepxl was updated to fc36cfd19834
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
ChemicalToolBox
- alphafold2 was updated to a58f7eb0df2c
Assembly
- cactus_cactus was updated to cd07731e4434
- cactus_export was updated to f14193ec1f50
- yahs was updated to 425e63adcc5d
Machine Learning
- keras_train_and_eval was updated to 03f61bb3ca43
Metagenomic Analysis
- cat_add_names was updated to acd9fe45eb81
- cat_bins was updated to 31853794ace2
- cat_contigs was updated to 7aebc0137f20
- cat_prepare was updated to a40bbd70b8b1
- cat_summarise was updated to 388e6678fa98
- drep_compare was updated to d99788b71ce7
- drep_dereplicate was updated to a0713a10c9f6
- kleborate was updated to 959920e3e800
- krakentools_alpha_diversity was updated to 9d0330e23bfd
- krakentools_beta_diversity was updated to 214ece7f1216
- krakentools_beta_diversity was updated to b33f117e9b67
- krakentools_combine_kreports was updated to e0d3f5969458
- krakentools_extract_kraken_reads was updated to 519e0835abd7
- krakentools_kreport2krona was updated to 88d274322340
- krakentools_kreport2mpa was updated to 93203a7af11b
Annotation
- pharokka was updated to 1d4fcd38d899
- seq2hla was updated to 86d0ce0560a1
Gemini
- gemini_set_somatic was updated to 230c975e7759
- gemini_set_somatic was updated to 3208dd1dbfe2
None
- data_manager_bakta was updated to bb463043c93e
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
Phylogenetics
- hyphy_meme was updated to 5fd8dc04d6af
- hyphy_prime was updated to 9d83d1ab0330
- hyphy_relax was updated to 5eb9d7217640
- hyphy_slac was updated to 2753a5c7597a
- hyphy_sm19 was updated to a809f93e7e6d
- hyphy_strike_ambigs was updated to 31e7f5a25db3
- hyphy_summary was updated to 4e7f1a7d18be
- picrust2_add_descriptions was updated to 6034c3f3ecf0
- picrust2_hsp was updated to 6eafc1e01a8c
- picrust2_metagenome_pipeline was updated to 415cb5d91168
- picrust2_pathway_pipeline was updated to 6077821e8ae7
- picrust2_pipeline was updated to 540aedfc81c7
- picrust2_place_seqs was updated to 680fb3eb574c
- picrust2_shuffle_predictions was updated to 881f2faa5fe7
Text Manipulation
- table_compute was updated to 02c3e335a695
Virology
- ivar_trim was updated to bcaa0d571ce2
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