On 2023-08-27, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #401
Metabolomics
- msnbase_readmsdata was updated to 11ab2081bd4a
- xcms_fillpeaks was updated to 26d77e9ceb49
- xcms_group was updated to d45a786cbc40
- xcms_merge was updated to 5bd125a3f3b0
- xcms_plot_chromatogram was updated to 024974037c4e
- xcms_retcor was updated to aa252eec9229
- xcms_summary was updated to 018a9771de28
- xcms_xcmsset was updated to b02d1992a43a
- ramclustr was updated to 050cfef6ba65
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
ChemicalToolBox
- enumerate_charges was updated to 0f3e5c69251e
Proteomics
- openms_fidoadapter was updated to b552ec8456e7
- openms_openpepxl was updated to 40cc19c0dbd6
- openms_openpepxl was updated to a2a842b00f9c
- openms_openpepxl was updated to fc36cfd19834
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
FASTA/FASTQ
- cpt_fasta_remove_id was updated to 78222649a59a
Annotation
- cpt_fix_sixpack was updated to efa4dfc23549
- cpt_get_orfs was updated to f97bc7f587a1
- cpt_gff_add_parents was updated to d839cfd1c3a6
- cpt_prep_for_apollo was updated to 6901154b1003
- cpt_remove_annotations was updated to 49f50c55a9f8
- cpt_req_phage_start was updated to cc3b78f2b4b2
- cpt_shinefind was updated to 6a5aac2a4c89
- cpt_type_filter was updated to 3df8d991938a
Convert Formats
- cpt_convert_mga was updated to 1bf722ba06e3
- cpt_fix_aragorn was updated to f0f0ab9db43f
Metagenomic Analysis
- concoct was updated to 16672a3c9b65
- concoct_coverage_table was updated to 0442e7102125
- concoct_cut_up_fasta was updated to f80e693468d8
- concoct_extract_fasta_bins was updated to c821c34ab9d9
- concoct_merge_cut_up_clustering was updated to 713189575b8b
None
- data_manager_bakta was updated to d74850cf4e42
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
Variant Calling
- ensembl_vep was updated to fdbd97ff825e
Virology
- cooc_mutbamscan was updated to d58a57db7a96
- cooc_tabmut was updated to eeb5c054ecf8
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