On 2024-03-24, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #437
DNA Metabarcoding
- obi_annotate was updated to d50dc96e3ce9
- obi_clean was updated to 08d873cdd5f6
- obi_convert was updated to e328ced6cf0a
- obi_grep was updated to 02bab5ff7c37
- obi_illumina_pairend was updated to 8cb6bd511879
- obi_ngsfilter was updated to 91a1ed0b486f
- obi_sort was updated to b6d9ea2fb41b
- obi_stat was updated to 5f4544915893
- obi_tab was updated to 4cf47c504672
- obi_uniq was updated to d4bea99366f9
Ecoregionalization
- ecoregion_brt_analysis was updated to f0d6938d0451
- ecoregion_brt_analysis was updated to f8962f1c832a
- ecoregion_clara_cluster was updated to 24a81631a8b5
- ecoregion_cluster_estimate was updated to 0f6542d0986e
- ecoregion_cluster_estimate was updated to 1b9522671e90
- ecoregion_eco_map was updated to 374555fc30bd
- ecoregion_taxa_seeker was updated to 788b118910a7
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
- qiime2__deblur__denoise_16S was updated to b883cbea5623
Proteomics
- maxquant was updated to 9c52362ae7bb
- metaquantome_db was updated to e63db1aa82ee
- metaquantome_expand was updated to 767c1d761aaf
- metaquantome_filter was updated to 35cc7ca0bdc7
- metaquantome_sample was updated to 06f6826d380c
- metaquantome_stat was updated to b9d453dca8d3
- metaquantome_viz was updated to 8bd7734309f6
- openms_openpepxl was updated to a2a842b00f9c
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
Metagenomic Analysis
- metagene_annotator was updated to 17c7ab82bfbc
- phyloseq_from_biom was updated to c0101c72b8af
- srst2 was updated to 81cea47ec685
- virannot_blast2tsv was updated to e889010415a1
- virannot_otu was updated to c9dac9b2e01c
- virannot_rps2tsv was updated to bbaa89f070f4
Annotation
- repeatmodeler was updated to 4a172d211285
- helixer was updated to e3846dc36c4d
- abritamr was updated to 5aaffb8d8161
- busco was updated to ea8146ee148f
- mitos was updated to e50a4f4542fc
- mitos2 was updated to 73b018c57e96
- omark was updated to 6f570ba54b41
- red was updated to db57bc3b57af
- tsebra was updated to 681fd806acc4
None
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
- data_manager_mapseq was updated to 4cd97cc67061
- data_manager_omamer was updated to e1502e4f8725
Evolution
- revoluzer_crex was updated to e0b7c98f29bb
- revoluzer_distmat was updated to af7528402a97
FASTA/FASTQ
- cutadapt was updated to 944ae523bacb
Mapping
- minimap2 was updated to 92678fcb1a5f
Multiple Alignments
- mummer_delta_filter was updated to e8fdceffea4c
- mummer_dnadiff was updated to 5561a1193611
- mummer_mummer was updated to 57f042937ba7
- mummer_mummerplot was updated to fb43e8887350
- mummer_nucmer was updated to 7cd7a55a678d
- mummer_show_coords was updated to cf3c9489c088
Phylogenetics
- hyphy_prime was updated to 4072360120e4
- usher was updated to 335665e15630
- usher was updated to 746b434c8fbb
- usher_matutils was updated to 79e2ee4e6ebb
- usher_matutils was updated to e0a0a473fc1e
RNA Analysis
- salmon was updated to f4d5237a84f6
- salmonquantmerge was updated to a896b8b7d264
Single-cell
- alevin was updated to c9944a2600f1
hca_sc_scanpy_tools
- seurat_plot was updated to 95d79f1134f0
- seurat_run_umap was updated to b9424c715a0d
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