Welcome to Galaxy for Ecology – a web platform to get, process, analyze and visualize ecological data

PNDB french Biodiversity e-infrastructure



Guide tour

Are you new to Galaxy, or returning after a long time, and looking for help to get started?

Tutorials

Want to learn about ecology analyses?



Projects

Citizen science on marmalade hoverflies

Vigie Nature H2020 European project

Want to classify hoverflies pictures?

The aim of the task is to classify ~5000 hoverfly images collected by the SPIPOLL citizen science project and identify the sex by looking at their relative eyes position.

Antarctic use cases

French BON EBV Operationalization pilot

TOOLS

Several tools corresponding to these workflows and tutorials can be found in Galaxy's left sidebar under the ecoregionalization section, the phylodiversity section et the interactive tools section.

Media annotation and analysis

IA Annotation

RELATED PROJECTS



Tools

Galaxy Ecology offers an extensive suite of tools designed for ecological data analysis. With hundreds of tools at your disposal, you can explore and perform a wide variety of tasks, including data manipulation, statistical analysis, ecological data retrieval, and visualization.

  • General Tools
    These tools cover data manipulation, text processing, file conversion, sorting, filtering, and a wide range of data visualization options, including bar charts, scatterplots, heatmaps, and more.

  • Statistical Tools
    A comprehensive set of statistical methods for data preprocessing, hypothesis testing, classification, multivariate analysis, and model-based techniques like regression and machine learning.

  • Ecological Tools
    Galaxy Ecology provides specialized tools for ecological data, including species occurrence data retrieval, phenology analysis, acoustic monitoring, and GIS data handling.

Explore the full range of tools by using the Tools Panel on the left side of the interface. There, you’ll find an organized list of categories to help you find exactly what you need for your ecological research.

Our Data Policy

Registered UsersUnregistered UsersFTP DataGDPR Compliance
User data on UseGalaxy.eu (i.e. datasets, histories) will be available as long as they are not deleted by the user. Once marked as deleted the datasets will be permanently removed within 14 days. If the user "purges" the dataset in the Galaxy, it will be removed immediately, permanently. An extended quota can be requested for a limited time period in special cases. Processed data will only be accessible during one browser session, using a cookie to identify your data. This cookie is not used for any other purposes (e.g. tracking or analytics). If UseGalaxy.eu service is not accessed for 90 days, those datasets will be permanently deleted. Any user data uploaded to our FTP server should be imported into Galaxy as soon as possible. Data left in FTP folders for more than 3 months, will be deleted. The Galaxy service complies with the EU General Data Protection Regulation (GDPR). You can read more about this on our Terms and Conditions.