Data Driven Research for Everyone
Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biological research.
- Accessible: Users can easily run tools without writing code or using the CLI; all via a user-friendly web interface.
- Reproducible: Galaxy captures all the metadata from an analysis, making it completely reproducible.
- Transparent: Users share and publish analyses via interactive pages that can enhance analyses with user annotations.
- Scalable: Galaxy can run on anything, from a laptop, to large clusters or the cloud.
The Freiburg Galaxy Team is offering several services to enable reproducible and accessible research for everyone:
We regularly provide workshops
But we cannot always meet capacity, so we've put all of our training materials online. This has become a community project with people from all over the world contributing training materials.
Topics include: variant analysis, transcriptomics, metagenomics, epigenetics, and many more!
We are aiming to maintain high competency and provide high-quality data analysis services to all our Galaxy users.
Therefore, we request that you acknowledge this service by including the members of the Freiburg Galaxy Team as co-authors if they have made a significant intellectual and/or organizational contribution to the work described (conceptualization, design, data analysis, data interpretation and/or input into drafting, revising or writing any portion of the manuscript).
Individuals who have contributed to the project, but whose contributions do not rise to the level justifying authorship, can be recognized in the acknowledgements section of the manuscript as follows:
The authors acknowledge the support of the Freiburg Galaxy Team: Person X and Prof. Rolf Backofen, Bioinformatics, University of Freiburg, Germany funded by Collaborative Research Centre 992 Medical Epigenetics (DFG grant SFB 992/1 2012) and the German Federal Ministry of Education and Research (BMBF grant 031 A538A de.NBI-RBC).
Additional funding of projects and/or provision of material expenses are welcome as well, to help support our growing Galaxy community in Freiburg.
Oct 23, 2020
New Paper on "NanoGalaxy: Nanopore long-read sequencing data analysis in Galaxy"
Oct 22, 2020
More than 8000 packages/containers in Bioconda/BioContainers from more than 1000 contributors
Oct 22, 2020
The EOSC-Life newsletter is out!
Oct 21, 2020
Oct 17, 2020
UseGalaxy.eu Tool Updates for 2020-10-17
Oct 14, 2020
Training Infrastructure Feedback from Leighton Pritchard
Dec 7, 2020 - Dec 10, 2020
Galaxy Interactive Tools Virtual Hackathon
Nov 19, 2020
Galaxy Training Network day - (online) CoFest and community call
Nov 9, 2020 - Nov 13, 2020
ELIXIR BioHackathon Europe
Nov 3, 2020
Diving into the Galaxy: an accessible and reproducible workbench with an European-wide distributed compute network
Oct 28, 2020 - Oct 30, 2020
RNA-seq Analysis using Galaxy
Oct 26, 2020