Data Driven Reseach for Everyone
Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biological research.
- Accessible: Users can easily configure and run tools without the need to write code, all via an user-friendly web-based interface.
- Reproducible: Galaxy captures the full metadata required so that any user can not only understand but also reproduce the complete computational analysis.
- Transparent: Users can extract, share and publish analyses via interactive, web-based documents that can enhance analyses with user-supplied annotation.
- Scalable: Galaxy scales: it can run on a local computer, on a large cluster or on the cloud
Training Infrastructure as a Service
We want to help you conduct your training seminars. Where you provide the training, we can provide you training infrastructure at no cost. Benefits of UseGalaxy.EU training infrastructure:
- Private queue, no wait times
- No Galaxy Maintenance
- No Galaxy Administration
Simply fill out the infrastructure request form and we'll get back to you shortly.
useGalaxy.eu: The European Galaxy instance
- Thousands of documented and maintained tools
- Free registration
- 250 GB per user (500 GB for ELIXIR members)
- Training capacities on demand
And even more!
The useGalaxy.eu team is supporting leading projects in the Galaxy community:
- Galaxy HiCExplorer to process, analyse and visualize Hi-C data
Supporting researchers by educating them in e.g. big data analysis, programming, data management, and Galaxy server administration is one of our goals as we believe that sharing of knowledge and the open science movement are the key points in future.
Regular workshops are provided by us: You can check our calendar to find out where our next workshops are.
No matter how hard we tried, we could not meet the demand for on-site and hands-on training. For those of you unable to attend one of our training sessions, we offer training materials, freely accessible online at https://training.galaxyproject.org.
We sincerely hope that our online training material will help you to get started. Please also check our Galaxy Interactive Tours.
We are aiming to maintain high competency and provide high quality data analysis services to all our Galaxy users.
Therefore we request that you acknowledge this service by including the members of the Freiburg Galaxy Team as co-authors if they have made a significant intellectual and/or organizational contribution to the work described (conceptualization, design, data analysis, data interpretation and/or input into drafting, revising or writing any portion of the manuscript).
Individuals who have contributed to the project, but whose contributions do not rise to the level justifying authorship, can be recognized in an acknowledgements section of the manuscript as follows:
The authors acknowledge the support of the Freiburg Galaxy Team: Person X and Prof. Rolf Backofen, Bioinformatics, University of Freiburg, Germany funded by Collaborative Research Centre 992 Medical Epigenetics (DFG grant SFB 992/1 2012) and German Federal Ministry of Education and Research (BMBF grant 031 A538A de.NBI-RBC).
Additional funding of projects and/or provision of material expenses are welcome as well, to help support our growing Galaxy community in Freiburg.
We want you to feel that useGalaxy.eu is a reliable service, so we are promising to give you advanced warning (when possible) about upcoming downtimes or any events that might degrade the availability of useGalaxy.eu.
- This is a best effort, we will give you as much warning as we possibly can...
- But we cannot make any promises that we will always be able to provide you this much notice
- The numbers we provide here are rough estimates
|<5 minutes||possibly without notice|
|1 hour||1 day|
|1 day||1 week|
|1 week||1 month|
Our Data Retention Policy
Registered UsersUser data on UseGalaxy.eu (i.e. datasets, histories) will be available as long as they are not deleted by the user. Once marked as deleted the datasets will be permanently removed within 14 days. If the user "purges" the dataset in the Galaxy, it will be removed immediately, permanently. An extended quota can be requested for a limited time period in special cases.
Unregistered UsersProcessed data will only be accessible during one browser session, using a cookie to identify your data. This cookie is not used for any other purposes (e.g. tracking or analytics.) If UseGalaxy.eu service is not accessed for 90 days, those datasets will be permanently deleted.
GDPR ComplianceThe Galaxy service will be compliant to the EU General Data Protection Regulation starting May, 25th 2018. You can read more about this on our GDPR page: usegalaxy.eu/terms
Jun 18, 2018
Database outage affecting UseGalaxy.eu
Jun 6, 2018
Data Carpentry workshop and CarpentryCon
Jun 5, 2018
Workshop for Galaxy training material and skills improvement
Jun 4, 2018
Temporary Quota Issue
May 30, 2018
Nanopolish tools for signal-level analysis of Oxford Nanopore sequencing data is now available in Galaxy
Sep 17, 2018 - Sep 21, 2018
Galaxy HTS data analysis workshop in Freiburg
Aug 27, 2018 - Aug 29, 2018
Next Generation Sequencing data analysis, LUMC
Jun 27, 2018 - Jun 29, 2018
A Primer for RNA-Sequencing Processing, Interpreting and Visualization in Jena
Jun 25, 2018 - Jun 30, 2018
Galaxy Community Conference and Bioinformatics Open Source Conference
Jun 4, 2018 - Jun 7, 2018