On 2019-12-07, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #168
FASTA/FASTQ
- umi_tools_count was updated to 276b4111b253
hca_sc_sccaf_tools
- run_sccaf was updated to 647d34f125bc
- sccaf_asses was updated to 37a4c22f600b
- sccaf_asses_merger was updated to 99d15ded4d5f
Mothur
- mothur_sffinfo was updated to f3a65ee4bfda
hca_sc_scanpy_tools
- scanpy_read_10x was updated to bd4a491baf39
- scanpy_regress_variable was updated to eed0986f53c7
- scanpy_run_diffmap was updated to 4a53eb16b926
- scanpy_run_dpt was updated to b1cb0c2831ea
- scanpy_run_fdg was updated to f5bc7d1b32fd
- scanpy_run_paga was updated to b9ccaa957667
- scanpy_run_pca was updated to 544d45fca48f
- scanpy_run_tsne was updated to 091e5d709ef7
- scanpy_run_umap was updated to 447c4a7e8561
- scanpy_scale_data was updated to 95887cb6859f
Metagenomic Analysis
- maxbin2 was updated to cfd50144a871
hca_sc_seurat_tools
- seurat_dim_plot was updated to daeca8f7a26e
- seurat_export_cellbrowser was updated to 80eec773c961
- seurat_filter_cells was updated to 30982e805f8c
- seurat_find_clusters was updated to bdabb6af06e4
- seurat_find_markers was updated to 7895b4bb6247
- seurat_find_variable_genes was updated to a6077346f869
- seurat_normalise_data was updated to 48174ec556de
- seurat_read10x was updated to 265dcc5bc1e8
- seurat_run_pca was updated to c4607a42113e
- seurat_run_tsne was updated to 13a27436f8ee
- seurat_scale_data was updated to 3d0bfc2a233e
Other Tools
- extract_genomic_dna was updated to 5cc8e93ee98f
Data Managers
- data_manager_dada2 was updated to bf7b2c14cabc
ChemicalToolBox
- alchemical_analysis was updated to c1fa72716efc
- gmx_fep was updated to 19d1d4c30402
- gmx_fep was updated to c1bcdba99bb3
RAD-seq
- stacks2_cstacks was updated to c541e62d6c56
Annotation
- busco was updated to 1e62c28ba91d
- transtermhp was updated to 012171ba9fce
Single-cell
- dropletutils was updated to 1797cbe967d1
SAM/BAM
- tag_pileup_frequency was updated to 580e8bcb6413
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