On 2020-11-14, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #247
Assembly
- shasta was updated to 60573349e9ae
Convert Formats
- genebed_maf_to_fasta was updated to 020c78e91cc5
- interval2maf was updated to b79f6002b176
Proteomics
- openms_idextractor was updated to ef4ecc9d45fb
- openms_openpepxl was updated to a2a842b00f9c
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
Metagenomic Analysis
- last was updated to 3de2195f32c0
Multiple Alignments
- maf_stats was updated to 0c84cce7b030
hca_sc_scanpy_tools
- anndata_ops was updated to 004cd2ccf7fc
- scanpy_compute_graph was updated to c7a904e3e09b
- scanpy_filter_cells was updated to 26a98de26847
- scanpy_filter_genes was updated to 228a51c5bc35
- scanpy_find_cluster was updated to 62d23f5d38f9
- scanpy_find_markers was updated to bfdca1eb4548
- scanpy_find_variable_genes was updated to 84711701573e
- scanpy_integrate_bbknn was updated to 032d52b00b7c
- scanpy_integrate_combat was updated to 27c74c83eae5
- scanpy_integrate_harmony was updated to 14076b38c3bb
- scanpy_integrate_mnn was updated to 1504334ef569
- scanpy_normalise_data was updated to 18ce7b88ff5d
- scanpy_parameter_iterator was updated to 4bb2ca8e2bd3
- scanpy_plot_embed was updated to 278dfcba81fd
- scanpy_plot_trajectory was updated to e8e54d565c92
- scanpy_read_10x was updated to ce87cc7d65ea
- scanpy_regress_variable was updated to 6acb47a58ac7
- scanpy_run_diffmap was updated to 0580285b842e
- scanpy_run_dpt was updated to ea6bea16d0e2
- scanpy_run_fdg was updated to 2ab5f5682507
- scanpy_run_paga was updated to a9e541954c1c
- scanpy_run_pca was updated to 7ee4417b24cc
- scanpy_run_tsne was updated to 5d92e38da1ea
- scanpy_run_umap was updated to a5731f913326
- scanpy_scale_data was updated to 33d809001520
Variant Calling
- variant_analyzer was updated to 3f1dbd2c59bf
ChemicalToolBox
- openbabel_addh was updated to 6e4b7e0c61a6
- openbabel_change_title was updated to 01ab890bf0ad
- openbabel_change_title was updated to 3ecaa9634126
- openbabel_compound_convert was updated to 1c66bf08f687
- openbabel_compound_convert was updated to e2c36f62e22f
- openbabel_filter was updated to df4dc55197dd
- openbabel_filter was updated to ff2dd4b7d918
- openbabel_genprop was updated to a72ae2711a97
- openbabel_genprop was updated to b249bf9be0d1
- openbabel_obgrep was updated to 274193d6c443
- openbabel_obgrep was updated to 78640d0127ce
- openbabel_remduplicates was updated to 50ca8845e7f5
- openbabel_remduplicates was updated to b2569e22b40c
- openbabel_remions was updated to 4e3b2049a4d3
- openbabel_remove_protonation_state was updated to e376ba0fcde0
- openbabel_remsmall was updated to aebc671bae78
- openbabel_remsmall was updated to d7f0ca1f2669
- openbabel_spectrophore_search was updated to 330514267c57
- openbabel_spectrophore_search was updated to afd14e10a318
- openbabel_structure_distance_finder was updated to 2c5c7da26e08
- openbabel_structure_distance_finder was updated to 4c9d6b47045c
- openbabel_subsearch was updated to 171c94786a56
- openbabel_subsearch was updated to c19608db6b15
- openbabel_svg_depiction was updated to 7672039a0bb0
- openbabel_svg_depiction was updated to d3b48303045b
- prepare_ligands_for_docking was updated to 5486f7a2b0cb
- prepare_ligands_for_docking was updated to de4c80d17527
- biomd_extract_clusters was updated to e0ecaf2d05fb
- biomd_neqgamma was updated to afcb925def69
- biomd_rmsd_clustering was updated to b9c46dbe9605
- fastpca was updated to 9ca30ad95444
- mdanalysis_angle was updated to 567f8c5d4680
- mdanalysis_angle was updated to a0d210b9d287
- mdanalysis_cosine_analysis was updated to 48d6a6eb438b
- mdanalysis_cosine_analysis was updated to a842da7ef42b
- mdanalysis_dihedral was updated to 976cfd44b921
- mdanalysis_dihedral was updated to aaa130695a2b
- mdanalysis_distance was updated to fd987ff06ceb
- mdanalysis_distance was updated to ffd6f8d159e1
- mdanalysis_endtoend was updated to 78aa3659fcd1
- mdanalysis_endtoend was updated to 795a5996cdc8
- mdanalysis_extract_rmsd was updated to 589f8ef21e58
- mdanalysis_hbonds was updated to 4c36f5ad2799
- mdanalysis_hbonds was updated to b17ce46509ad
- mdanalysis_ramachandran_plot was updated to 70a2d548e62c
- mdanalysis_ramachandran_plot was updated to be5eaea0b2d1
- mdanalysis_ramachandran_protein was updated to 060b9d9ec8cf
- mdanalysis_ramachandran_protein was updated to 0f270722aca6
- mdanalysis_rdf was updated to 1a220575ad7a
- mdanalysis_rdf was updated to 49076afc90b1
Annotation
- hmmer_alimask was updated to b4dc65565864
- hmmer_hmmalign was updated to b2453ee52845
- hmmer_hmmbuild was updated to 750269125dc9
- hmmer_hmmconvert was updated to 8d5ec58d2172
- hmmer_hmmemit was updated to 9415f29a3926
- hmmer_hmmfetch was updated to fb459c8fb2ba
- hmmer_hmmscan was updated to be7097d6e3ff
- hmmer_hmmsearch was updated to b774ae8e1609
- hmmer_jackhmmer was updated to 5113c71c7031
- hmmer_nhmmer was updated to b4fe2f703b4b
- hmmer_nhmmscan was updated to 2d406da5d34e
- hmmer_phmmer was updated to c1de05e20868
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