On 2021-02-13, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #261
Graph/Display Data
- jbrowse was updated to 8774b28235bb
- jvarkit_wgscoverageplotter was updated to ac048a34cac3
Variant Calling
- bcftools_consensus was updated to d6dc477167f8
- bcftools_call was updated to 5801eff9ac7e
- bcftools_cnv was updated to 01d6b7d6365e
- bcftools_csq was updated to fdd127bd4a32
- bcftools_merge was updated to e03f2f3ac3a9
- bcftools_norm was updated to c077f71d351f
- bcftools_plugin_color_chrs was updated to c39113e2ae34
- bcftools_plugin_frameshifts was updated to eb22990a2be9
FASTA/FASTQ
- umi_tools_count was updated to 8250ea3a1501
Get Data
- iedb_api was updated to 7ed6dda64a81
- sra_tools was updated to e08a7ad4378b
RNA Analysis
- transdecoder was updated to d0d4cef4f967
Proteomics
- openms_openpepxl was updated to a2a842b00f9c
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
hca_sc_scanpy_tools
- scanpy_run_pca was updated to 988edd5fa902
hca_sc_seurat_tools
- seurat_find_neighbours was updated to ab622ffd7c7f
- seurat_find_variable_genes was updated to 051953328516
- seurat_normalise_data was updated to c5d4fce10c45
- seurat_read10x was updated to 893ea1e1eed3
- seurat_run_pca was updated to 3fd59cdcb477
- seurat_scale_data was updated to 4147dc085d45
hca_sc_scmap_tools
- scmap_get_std_output was updated to 2f63b1cd9122
- scmap_index_cell was updated to dd0b44bd359a
- scmap_index_cluster was updated to 4ff68faee6e1
- scmap_preprocess_sce was updated to 80d97bdbfc7b
- scmap_scmap_cell was updated to 65b719530dd5
- scmap_scmap_cluster was updated to a0da1d3155dd
- scmap_select_features was updated to e5aaa5bea06a
hca_sc_scpred_tools
- scpred_get_feature_space was updated to 17325882fa72
- scpred_get_std_output was updated to 598b1d9dd135
- scpred_predict_labels was updated to b869bb6d4b01
- scpred_train_model was updated to a7269f8f45aa
Metagenomic Analysis
- dada2_plotqualityprofile was updated to f947b4bb5107
- humann2 was updated to bb13650e8115
- humann2_associate was updated to e57b437186b3
- humann2_barplot was updated to 56cb2b0269d1
- humann2_genefamilies_genus_level was updated to 79cd822debef
- humann2_join_tables was updated to 300fd72ce167
- humann2_reduce_table was updated to 7f7cc8d4d6b7
- humann2_regroup_table was updated to 88ff1d78fd30
- humann2_rename_table was updated to 252ae00df89c
- humann2_renorm_table was updated to cd235981c423
- humann2_rna_dna_norm was updated to 6893a2b1da17
- humann2_split_stratified_table was updated to 28763c8b43f8
- humann2_split_table was updated to 63cc5fd0f8d6
- humann2_strain_profiler was updated to 1595f7cadbf9
- humann2_unpack_pathways was updated to 3115a530686e
Imaging
- spyboat was updated to 639d2031d998
FASTA/FASTQ
- trimns was updated to 30178a68af68
Assembly
- mitobim was updated to ea46115c7f1e
- purge_dups was updated to 8ec117da1796
Data Managers
- data_manager_build_kma_index was updated to 889cc43b72d6
Nanopore
- medaka_consensus was updated to 5901bb391198
- medaka_consensus was updated to fbf007713188
- medaka_consensus_pipeline was updated to 35666d44fe7a
- medaka_consensus_pipeline was updated to d915879a88bc
- medaka_variant was updated to aabb4e1c0b7b
- medaka_variant_pipeline was updated to 148f32860445
- medaka_variant_pipeline was updated to ea1833858055
Metabolomics
- metfrag_vis was updated to 3dbe79671820
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