On 2022-02-06, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #310
Variant Calling
- artic_guppyplex was updated to 372def2f8fd6
- artic_minion was updated to 7a7d7f30ddfc
- artic_minion was updated to f5643712dca7
- bbtools_callvariants was updated to d1912018a603
- bcftools_annotate was updated to 403553ae19f6
- bcftools_call was updated to 072f606e2e69
- bcftools_call was updated to 5801eff9ac7e
- bcftools_concat was updated to 874cc12ae316
- bcftools_concat was updated to d40d4bf05718
- bcftools_consensus was updated to d6dc477167f8
- bcftools_convert_from_vcf was updated to b8e9da766b0f
- bcftools_convert_to_vcf was updated to fec517907949
- bcftools_csq was updated to f10f5b4e7854
- bcftools_csq was updated to fdd127bd4a32
- bcftools_filter was updated to 6ca7c55a27e8
- bcftools_gtcheck was updated to 672b6c02fbc7
- bcftools_isec was updated to 02f349bdbf96
- bcftools_merge was updated to 9473302f4588
- bcftools_merge was updated to e03f2f3ac3a9
- bcftools_mpileup was updated to 0dbff46d5a1b
- bcftools_norm was updated to a62e934346f5
- bcftools_norm was updated to c077f71d351f
- bcftools_plugin_color_chrs was updated to 71dfde92fd57
- bcftools_plugin_color_chrs was updated to c39113e2ae34
- bcftools_plugin_frameshifts was updated to 48ac4d611e92
- bcftools_plugin_frameshifts was updated to eb22990a2be9
- bcftools_query was updated to c9c5718edc19
- bcftools_reheader was updated to 9ef52d95114b
- bcftools_roh was updated to b76adb2f1c51
- bcftools_view was updated to 98d5499ead46
Proteomics
- openms_openpepxl was updated to a2a842b00f9c
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
Convert Formats
- compress_file was updated to 09ea79f9f260
- ucsc_twobittofa was updated to 8067dfa00ed2
Get Data
- ncbi_datasets was updated to 37c98f8a2497
Assembly
- pretext_map was updated to dfb8a4497339
- shovill was updated to 2a9baa0c4316
Mapping
- bowtie2 was updated to cd659e8cc5fa
- bbtools_bbmap was updated to 6d44c9f1a42b
NCBI Blast
- bbtools_bbduk was updated to a9c9d768b751
Annotation
- spaln was updated to 32c11a4b5dbf
Phylogenetics
- nextalign was updated to 9ad6e80ea21f
- nextclade was updated to b60593baff7d
- pangolin was updated to 5f8727ff21e7
FASTA/FASTQ
- ucsc_fasplit was updated to bf04bd405d5b
None
- data_manager_interproscan was updated to 7776cb18fdf8
Metagenomic Analysis
- customize_metaphlan_database was updated to 150ebe4d0fd9
- data_manager_build_bracken_database was updated to fd5830f88314
- extract_metaphlan_database was updated to 97ad0d817a45
- merge_metaphlan_tables was updated to ab1a9a932182
- metaphlan was updated to a16313517e55
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