On 2022-07-03, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #334

Join, Subtract and Group

• datamash_ops was updated to 746e8e4bf929
• datamash_reverse was updated to f198773344e4
• datamash_transpose was updated to ac092723240d

Proteomics

• openms_openpepxl was updated to a2a842b00f9c
• openms_percolatoradapter was updated to 0fc9ae55bcfc
• openms_percolatoradapter was updated to e7881a82b56d
• openms_semanticvalidator was updated to b60c5420dac6
• openms_xfdr was updated to 81402a5e4173
• openms_xfdr was updated to 9a6e3bb0f358

hca_sc_scanpy_tools

• scanpy_find_markers was updated to af5e4efa9e66

Metagenomic Analysis

• concoct was updated to 7a145c72d375
• concoct_coverage_table was updated to 052e6bc06ea3
• concoct_cut_up_fasta was updated to 137ede2b48c0
• concoct_extract_fasta_bins was updated to 92a2d9109528
• concoct_merge_cut_up_clustering was updated to ce1a3ce0e807
• das_tool was updated to a8e434ebe961
• drep_compare was updated to 54aa421c2911
• drep_dereplicate was updated to 368cb4bef9d8
• fasta_to_contig2bin was updated to 5033d753964b
• recentrifuge was updated to 09b7b0b2e2c2

Variant Calling

• delly_call was updated to c34eab9d5134
• delly_classify was updated to df4300f300e4
• delly_cnv was updated to 8ad49c4272ea
• delly_filter was updated to 74f9f312c713
• delly_lr was updated to 7bd397ff21a2
• delly_merge was updated to 6c44bbc0eaa5
• ensembl_vep was updated to 27fd1c1f00a8
• vcf2maf was updated to 2973994fecd6

Nanopore

• medaka_consensus was updated to d6cddc06aeae
• medaka_consensus_pipeline was updated to cb34f00cc10f
• medaka_variant was updated to cc36773a3681
• medaka_variant_pipeline was updated to 1d62240feff3

Assembly

• yahs was updated to d87433f2a54d

None

• data_manager_build_kraken2_database was updated to 9002633b4737

Annotation

• annotatemyids was updated to 4f2967b27e67