On 2022-08-28, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #345

Assembly

• rnaspades was updated to 1d06c8b38e77
• spades_biosyntheticspades was updated to 051fd2db8a27
• spades_coronaspades was updated to 34305b013402
• spades_metaplasmidspades was updated to e5a3b75a271f
• spades_metaviralspades was updated to 328aa71f0f3c
• spades_plasmidspades was updated to 1708851f8804
• spades_rnaviralspades was updated to d5fb354f745d
• metaspades was updated to fd128c111ab0
• spades was updated to 33368fec3b70

RNA Analysis

• circexplorer2 was updated to 465d6578b4d0
• deseq2 was updated to 8fe98f7094de

Proteomics

• openms_openpepxl was updated to a2a842b00f9c
• openms_percolatoradapter was updated to 0fc9ae55bcfc
• openms_percolatoradapter was updated to e7881a82b56d
• openms_xfdr was updated to 81402a5e4173
• openms_xfdr was updated to 9a6e3bb0f358

Metagenomic Analysis

• bracken was updated to 79450f7fd718
• megan_blast2rma was updated to 45fd617493eb
• megan_daa2rma was updated to 8a9cad43dcde
• megan_daa_meganizer was updated to 6ca88053665c
• megan_sam2rma was updated to ef0443c0eaba
• recentrifuge was updated to fe733f05c2f8
• srst2 was updated to f9a0855c792d

Single-cell

• raceid_clustering was updated to 0bff0ee0683a
• raceid_filtnormconf was updated to b83fbc90161e
• raceid_inspectclusters was updated to f3eb2291da05
• raceid_inspecttrajectory was updated to a6821f856a1e
• raceid_trajectory was updated to 2af7c5086a96

Variant Calling

• gatk4_mutect2 was updated to fb0bb7174530

Get Data

• ncbi_datasets was updated to 18eed8fa7f23

Annotation

• gubbins was updated to 96e6283e4745

Picard

• picard was updated to b502c227b5e6