On 2022-10-16, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #353

Proteomics

• openms_openpepxl was updated to a2a842b00f9c
• openms_percolatoradapter was updated to 0fc9ae55bcfc
• openms_percolatoradapter was updated to e7881a82b56d
• openms_xfdr was updated to 81402a5e4173
• openms_xfdr was updated to 9a6e3bb0f358

ChemicalToolBox

• alphafold2 was updated to c0e71cb2bd1b

Annotation

• netboxr was updated to 785ed8621503
• integron_finder was updated to 1ae00120dd24
• miniprot_index was updated to d6a874226260
• plasmidfinder was updated to e23b96d79dc0
• red was updated to 18a46265455b

Metagenomic Analysis

• polypolish was updated to aaa868913641
• semibin was updated to 7b382efabb98
• semibin_bin was updated to 474701f91bcd
• semibin_concatenate_fasta was updated to dcc81bfe5f6a
• semibin_generate_cannot_links was updated to 078414a1226b
• semibin_generate_sequence_features was updated to 07bf5268724f
• semibin_train was updated to 08cc1cd58f38

Nanopore

• medaka_consensus was updated to 682d1e2c8be4
• medaka_consensus_pipeline was updated to 79e9a869f40e
• medaka_variant was updated to ec699520444c

RNA Analysis

• cemitool was updated to 3f9ff31c88bb

FASTA/FASTQ

• cutadapt was updated to 135b80fb1ac2

Assembly

• getorganelle was updated to 8b330a577046
• hapog was updated to c61bc8bb5f1e
• ragtag was updated to b3c3217c0cbc

None

• data_manager_semibin was updated to 676915c44e1e

Phylogenetics

• pangolin was updated to ca337cce3888

Imaging

• cell_intensity_processing was updated to 7a77ed0e579a
• gate_finder was updated to 6df8d6e42152
• mesmer was updated to 53240d7c1fc5
• rename_tiff_channels was updated to 09e240a12897
• squidpy was updated to be0e7952e229
• vitessce_spatial was updated to 9f60ef2d586e
• spyboat was updated to 8815bc7e9cef