On 2023-01-22, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #369

QIIME 2

• qiime2__alignment__mafft was updated to a8962b34c94e
• qiime2__alignment__mafft_add was updated to 4fde174f0118
• qiime2__alignment__mask was updated to 58797be8efd4
• qiime2__composition__add_pseudocount was updated to c6780899249e
• qiime2__composition__ancom was updated to 4696fc685d83
• qiime2__composition__ancombc was updated to 9b2a68d3017f
• qiime2__composition__tabulate was updated to 359aa4321add
• qiime2__cutadapt__demux_paired was updated to d58b93d0a723
• qiime2__cutadapt__demux_single was updated to d244802d52d0
• qiime2__cutadapt__trim_paired was updated to 4f340404bbf8
• qiime2__cutadapt__trim_single was updated to 1026d5863b7c
• qiime2__dada2__denoise_ccs was updated to 9977f9d23166
• qiime2__dada2__denoise_paired was updated to bbaba1707475
• qiime2__dada2__denoise_pyro was updated to 1fa5664f9157
• qiime2__dada2__denoise_single was updated to 3c8340e400df
• qiime2__deblur__denoise_other was updated to 86e36a2b44b0
• qiime2__deblur__visualize_stats was updated to e62bac3eb4af
• qiime2__demux__emp_paired was updated to e6540fbc9b50
• qiime2__demux__emp_single was updated to 335abb486193
• qiime2__demux__filter_samples was updated to 7573001162c8
• qiime2__demux__subsample_paired was updated to 522cc8ebcf4f
• qiime2__demux__subsample_single was updated to 12747289fc83
• qiime2__demux__summarize was updated to 222b50c1cb52
• qiime2__diversity__adonis was updated to 28d5145fbbe3
• qiime2__diversity__alpha was updated to 87b68b482c8e
• qiime2__diversity__alpha_correlation was updated to 9235f6a16926
• qiime2__diversity__alpha_group_significance was updated to 25b94f589fc8
• qiime2__diversity__alpha_phylogenetic was updated to b6e20cd4fd2c
• qiime2__diversity__alpha_rarefaction was updated to ed21beb2e60f
• qiime2__diversity__beta was updated to eb36fbb83a9d
• qiime2__diversity__beta_correlation was updated to 913fde2097a3
• qiime2__diversity__beta_group_significance was updated to ae04ef51094f
• qiime2__diversity__beta_phylogenetic was updated to 9de0fa39f017
• qiime2__diversity__beta_rarefaction was updated to 1ab2573cba43
• qiime2__diversity__bioenv was updated to 0f90022f70de
• qiime2__diversity__core_metrics was updated to 4b8cdacb02f5
• qiime2__diversity__core_metrics_phylogenetic was updated to f4305c66e23d
• qiime2__diversity__filter_distance_matrix was updated to 40dc453ee8fd
• qiime2__diversity__mantel was updated to f5f2c923cda4
• qiime2__diversity__pcoa was updated to 0b004354dcd2
• qiime2__diversity__pcoa_biplot was updated to 5279c32b6eab
• qiime2__diversity__procrustes_analysis was updated to 111d05bd9e0d
• qiime2__diversity__tsne was updated to 1e30542264c3
• qiime2__diversity__umap was updated to 32c5fea4831a
• qiime2__diversity_lib__alpha_passthrough was updated to 86034ce5e0b5
• qiime2__diversity_lib__beta_passthrough was updated to 66045b02d6c1
• qiime2__diversity_lib__beta_phylogenetic_meta_passthrough was updated to 1f01b410d3f2
• qiime2__diversity_lib__beta_phylogenetic_passthrough was updated to 423e0a6e9a1f
• qiime2__diversity_lib__bray_curtis was updated to b007e2c3c08b
• qiime2__diversity_lib__faith_pd was updated to f08636f56fd7
• qiime2__diversity_lib__jaccard was updated to a7a8b9b1fa1e
• qiime2__diversity_lib__observed_features was updated to c75e3e049c2f
• qiime2__diversity_lib__pielou_evenness was updated to 70becbb8baf2
• qiime2__diversity_lib__shannon_entropy was updated to 86209e66e3b3
• qiime2__diversity_lib__unweighted_unifrac was updated to 5c190c90bab0
• qiime2__diversity_lib__weighted_unifrac was updated to 85f762ce919f
• qiime2__emperor__biplot was updated to 5aced4a38720
• qiime2__emperor__plot was updated to 7c9ec8b8b7f8
• qiime2__emperor__procrustes_plot was updated to bd0dbc487394
• qiime2__feature_classifier__blast was updated to c6323c5935e2
• qiime2__feature_classifier__classify_consensus_blast was updated to fbead83526a1
• qiime2__feature_classifier__classify_consensus_vsearch was updated to f40e6da10c03
• qiime2__feature_classifier__classify_hybrid_vsearch_sklearn was updated to 4d9059e67f87
• qiime2__feature_classifier__classify_sklearn was updated to eee36ff6529a
• qiime2__feature_classifier__extract_reads was updated to 920dbc6886d7
• qiime2__feature_classifier__find_consensus_annotation was updated to 4fafff628c81
• qiime2__feature_classifier__fit_classifier_naive_bayes was updated to 42f3a9cab210
• qiime2__feature_classifier__fit_classifier_sklearn was updated to e736fe382938
• qiime2__feature_classifier__vsearch_global was updated to 2058da5b95d7
• qiime2__feature_table__core_features was updated to 3ab02629e494
• qiime2__feature_table__filter_features was updated to a63fa31b8367
• qiime2__feature_table__filter_features_conditionally was updated to dbeb5a365844
• qiime2__feature_table__filter_samples was updated to 552388e54b68
• qiime2__feature_table__filter_seqs was updated to e7b65e8f7e68
• qiime2__feature_table__group was updated to 94617586f2cb
• qiime2__feature_table__heatmap was updated to a8de96a8b8eb
• qiime2__feature_table__merge was updated to bbef44c4221b
• qiime2__feature_table__merge_seqs was updated to b46e5d243a98
• qiime2__feature_table__merge_taxa was updated to 0ffd4aef0c59
• qiime2__feature_table__presence_absence was updated to 88b3f5ff20b3
• qiime2__feature_table__rarefy was updated to 985c7f96ce2a
• qiime2__feature_table__relative_frequency was updated to e0ecbe54ffa8
• qiime2__feature_table__rename_ids was updated to d473dc9e00e2
• qiime2__feature_table__subsample was updated to d32dc747e2dd
• qiime2__feature_table__summarize was updated to c7553080ec2e
• qiime2__feature_table__tabulate_seqs was updated to 38b618d1eb4d
• qiime2__feature_table__transpose was updated to 14196448788e
• qiime2__fragment_insertion__classify_otus_experimental was updated to 042aaca35af1
• qiime2__fragment_insertion__filter_features was updated to 0cd2b96adce2
• qiime2__fragment_insertion__sepp was updated to 3d97bd4f5a7b
• qiime2__gneiss__assign_ids was updated to dc55b54f3fac
• qiime2__gneiss__correlation_clustering was updated to 863dfa520024
• qiime2__gneiss__dendrogram_heatmap was updated to ec24bc691af1
• qiime2__gneiss__gradient_clustering was updated to 1aeb0c093631
• qiime2__gneiss__ilr_hierarchical was updated to 4dacbd452535
• qiime2__gneiss__ilr_phylogenetic was updated to b2f1851509f6
• qiime2__gneiss__ilr_phylogenetic_differential was updated to f37156e185ea
• qiime2__gneiss__ilr_phylogenetic_ordination was updated to f9e75fc8334b
• qiime2__longitudinal__anova was updated to b8863095f1a9
• qiime2__longitudinal__feature_volatility was updated to e2fd93e4e3f7
• qiime2__longitudinal__first_differences was updated to 372affefd8a3
• qiime2__longitudinal__first_distances was updated to 405565578b7c
• qiime2__longitudinal__linear_mixed_effects was updated to 2f4d65c8cfc0
• qiime2__longitudinal__maturity_index was updated to 440d5bfda88c
• qiime2__longitudinal__nmit was updated to 738ef153dcb1
• qiime2__longitudinal__pairwise_differences was updated to f4eea9fd94e2
• qiime2__longitudinal__pairwise_distances was updated to ab8727358817
• qiime2__longitudinal__plot_feature_volatility was updated to 1a9474d0391a
• qiime2__longitudinal__volatility was updated to bea0cdf2d9c8
• qiime2__metadata__distance_matrix was updated to a75c3ed80cff
• qiime2__metadata__shuffle_groups was updated to 69c87f602b5a
• qiime2__metadata__tabulate was updated to f6763a86190b
• qiime2__phylogeny__align_to_tree_mafft_fasttree was updated to 43e5dd36de74
• qiime2__phylogeny__align_to_tree_mafft_iqtree was updated to 9f7b98404a1f
• qiime2__phylogeny__align_to_tree_mafft_raxml was updated to c1018e6b9e55
• qiime2__phylogeny__fasttree was updated to 54e234742860
• qiime2__phylogeny__filter_table was updated to 63f054c1fce2
• qiime2__phylogeny__filter_tree was updated to 2f35a9736467
• qiime2__phylogeny__iqtree was updated to 931254bf17a4
• qiime2__phylogeny__iqtree_ultrafast_bootstrap was updated to caa6e396efc4
• qiime2__phylogeny__midpoint_root was updated to 2de661df7aa8
• qiime2__phylogeny__raxml was updated to 1f553c9cc99e
• qiime2__phylogeny__raxml_rapid_bootstrap was updated to 444a88ecf0d8
• qiime2__phylogeny__robinson_foulds was updated to abe6db32295f
• qiime2__quality_control__bowtie2_build was updated to dc6b98098f4f
• qiime2__quality_control__evaluate_composition was updated to 8f17025fb019
• qiime2__quality_control__evaluate_seqs was updated to 7f6c6e75ad0d
• qiime2__quality_control__evaluate_taxonomy was updated to 2719c0bf3bd7
• qiime2__quality_control__exclude_seqs was updated to f697a0b6a702
• qiime2__quality_control__filter_reads was updated to bb1d6b8b06a8
• qiime2__quality_filter__q_score was updated to 2c4de53c8903
• qiime2__sample_classifier__classify_samples was updated to e5daff8f4e9e
• qiime2__sample_classifier__classify_samples_from_dist was updated to da06a9b29ebc
• qiime2__sample_classifier__classify_samples_ncv was updated to 9c6128727a71
• qiime2__sample_classifier__confusion_matrix was updated to 37d091c9f5ce
• qiime2__sample_classifier__fit_classifier was updated to 71cd01b7a74f
• qiime2__sample_classifier__fit_regressor was updated to c0aa54edd09e
• qiime2__sample_classifier__heatmap was updated to c8a9c7b66934
• qiime2__sample_classifier__metatable was updated to f58e813e201d
• qiime2__sample_classifier__predict_classification was updated to 8efd4ae79026
• qiime2__sample_classifier__predict_regression was updated to cb01bdeace09
• qiime2__sample_classifier__regress_samples was updated to 7d56c6806c36
• qiime2__sample_classifier__regress_samples_ncv was updated to fba2a1dc2e30
• qiime2__sample_classifier__scatterplot was updated to b2a04cea7140
• qiime2__sample_classifier__split_table was updated to b3fdc6dd0eab
• qiime2__sample_classifier__summarize was updated to 8fa73ff177a2
• qiime2__taxa__barplot was updated to 5750bac5b744
• qiime2__taxa__collapse was updated to 96d3a6a511bc
• qiime2__taxa__filter_seqs was updated to c4e992863672
• qiime2__taxa__filter_table was updated to 4d6cd6706bfd
• qiime2__vsearch__cluster_features_closed_reference was updated to bdfd1704be32
• qiime2__vsearch__cluster_features_de_novo was updated to a753a1136636
• qiime2__vsearch__cluster_features_open_reference was updated to df39d339740c
• qiime2__vsearch__dereplicate_sequences was updated to 89cf98a14b38
• qiime2__vsearch__fastq_stats was updated to 826f1e13fbd1
• qiime2__vsearch__merge_pairs was updated to b26cb5419c39
• qiime2__vsearch__uchime_denovo was updated to a02a20641fb6
• qiime2__vsearch__uchime_ref was updated to 7baf77299428
• qiime2_core__tools__export was updated to d3b1853c4efd
• qiime2_core__tools__import was updated to 5d9a36073ed6

Proteomics

• openms_openpepxl was updated to a2a842b00f9c
• openms_percolatoradapter was updated to 0fc9ae55bcfc
• openms_percolatoradapter was updated to e7881a82b56d
• openms_xfdr was updated to 81402a5e4173
• openms_xfdr was updated to 9a6e3bb0f358

Assembly

• hifiasm_meta was updated to 15dbb444df71

Single-cell

• cite_seq_count was updated to 3df3d1b51110