On 2023-06-04, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #388
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
Proteomics
- calisp was updated to 6d93529d19d4
- openms_accuratemasssearch was updated to 532cf3ddcc91
- openms_assaygeneratormetabo was updated to 83f5e5c1209c
- openms_baselinefilter was updated to ddbae9eb797e
- openms_clustermasstraces was updated to 10c41ad01df5
- openms_clustermasstracesbyprecursor was updated to 75480fff2586
- openms_cometadapter was updated to e75929491905
- openms_compnovo was updated to cd9449dbe4e4
- openms_compnovocid was updated to 123ea5520652
- openms_consensusid was updated to f4be248c3d47
- openms_consensusmapnormalizer was updated to d9802c463a2f
- openms_cruxadapter was updated to a915cadc2f07
- openms_cvinspector was updated to f95704542c63
- openms_databasefilter was updated to 0878a55de9e7
- openms_decharger was updated to 566029692c59
- openms_decoydatabase was updated to 25529df60a81
- openms_demeanderize was updated to 2425a98560f5
- openms_digestor was updated to 13399dc8f687
- openms_dtaextractor was updated to 79706b7647c3
- openms_eicextractor was updated to f253d41d9170
- openms_epifany was updated to f3096a586de8
- openms_erpairfinder was updated to d6ef464ff66b
- openms_externalcalibration was updated to 1168fee85066
- openms_falsediscoveryrate was updated to 6ccbf9a2072c
- openms_featurefindercentroided was updated to 1a709ba66f2f
- openms_featurefinderidentification was updated to 5dc928c83939
- openms_featurefinderisotopewavelet was updated to 832c471f0d31
- openms_featurefindermetabo was updated to 2451315543f9
- openms_featurefindermetaboident was updated to ae20e8a6d309
- openms_featurefindermrm was updated to 646ebe78d904
- openms_featurefindermultiplex was updated to 9876bda3ec53
- openms_featurelinkerlabeled was updated to d9ebdc2e55fe
- openms_featurelinkerunlabeled was updated to b46263c3ee99
- openms_featurelinkerunlabeledkd was updated to 718c0e2904cb
- openms_featurelinkerunlabeledqt was updated to aa8658367608
- openms_ffeval was updated to 71b4a047afe5
- openms_fidoadapter was updated to 1595601708ec
- openms_fileconverter was updated to 2a93a25f0599
- openms_filefilter was updated to fe4e4587d265
- openms_fileinfo was updated to 4af67edd5aef
- openms_filemerger was updated to b2fc8da99bcc
- openms_fuzzydiff was updated to c940abd8d622
- openms_gnpsexport was updated to 2da14ae3844a
- openms_highresprecursormasscorrector was updated to d3546bb9fd8e
- openms_idconflictresolver was updated to ca1740533b59
- openms_idextractor was updated to 589bf635f424
- openms_idfileconverter was updated to 7d0eb300f360
- openms_idfilter was updated to a5d785af0ad8
- openms_idmapper was updated to adca857b4884
- openms_idmassaccuracy was updated to 585f8235da7e
- openms_idmerger was updated to 34e7afee141d
- openms_idposteriorerrorprobability was updated to 986e03d3201e
- openms_idripper was updated to 7960e660446e
- openms_idrtcalibration was updated to 7ff821b34ebc
- openms_idscoreswitcher was updated to 4204882495f2
- openms_idsplitter was updated to 64e35457d86e
- openms_internalcalibration was updated to f49a58e03ada
- openms_isobaricanalyzer was updated to 130ffca1ec5b
- openms_labeledeval was updated to 45b7070b3366
- openms_luciphoradapter was updated to bf2bf60c8af2
- openms_mapaligneridentification was updated to 8434f070e939
- openms_mapalignerposeclustering was updated to 246847b3a188
- openms_mapalignerspectrum was updated to 085863ba8f0e
- openms_mapalignertreeguided was updated to 502c7e321ba5
- openms_mapnormalizer was updated to 35acd0d34d48
- openms_maprttransformer was updated to aec26bf377fb
- openms_mapstatistics was updated to 045995dc36bc
- openms_maraclusteradapter was updated to f7195ee7e18d
- openms_mascotadapter was updated to 27e308170367
- openms_mascotadapteronline was updated to 3f3d33920f90
- openms_masscalculator was updated to bcd50cd4fe42
- openms_masstraceextractor was updated to 29d893e855c6
- openms_metaboliteadductdecharger was updated to 7e7e6a5b9c01
- openms_metabolitespectralmatcher was updated to 75ccdbc2475d
- openms_metaprosip was updated to 819ed5aae76f
- openms_mrmmapper was updated to 9a6f6a0ed604
- openms_mrmpairfinder was updated to bd57c94d50fb
- openms_mssimulator was updated to 9e6a371d539b
- openms_msstatsconverter was updated to e3fb590554fd
- openms_multiplexresolver was updated to 021fdb80f204
- openms_myrimatchadapter was updated to 2253c491c157
- openms_mzmlsplitter was updated to 095b7d42bfc2
- openms_mztabexporter was updated to 2735db4dd8d9
- openms_noisefiltergaussian was updated to 47982606f542
- openms_noisefiltersgolay was updated to cf86c9091cb3
- openms_novoradapter was updated to 34dda034b019
- openms_nucleicacidsearchengine was updated to 92864c71ac6a
- openms_omssaadapter was updated to 1672e6be33d3
- openms_openpepxl was updated to 4d2b77fd7a28
- openms_openpepxl was updated to a2a842b00f9c
- openms_openpepxllf was updated to 8bfa9d787dc7
- openms_openswathanalyzer was updated to 08488066d588
- openms_openswathassaygenerator was updated to de7a553552a6
- openms_openswathchromatogramextractor was updated to f78d734b7c01
- openms_openswathconfidencescoring was updated to c1809c05ae8c
- openms_openswathdecoygenerator was updated to 496cf619e311
- openms_openswathfeaturexmltotsv was updated to 844c32358954
- openms_openswathfilesplitter was updated to 4bb198c0bd3e
- openms_openswathmzmlfilecacher was updated to f82b320ceb90
- openms_openswathrewritetofeaturexml was updated to b956337a7473
- openms_openswathrtnormalizer was updated to d31426ef20f6
- openms_openswathworkflow was updated to 4a7b96835140
- openms_peakpickerhires was updated to 6b01678ec2fc
- openms_peakpickeriterative was updated to 9547baeca6a1
- openms_peakpickerwavelet was updated to 2077efa205de
- openms_pepnovoadapter was updated to 533859c7e75f
- openms_peptideindexer was updated to d6aca689dd48
- openms_percolatoradapter was updated to 016964c597f5
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_phosphoscoring was updated to 996ca7c1d45e
- openms_precursorionselector was updated to 1cae2aac2260
- openms_precursormasscorrector was updated to 35123b3fe2f2
- openms_proteininference was updated to 98adda3af74a
- openms_proteinquantifier was updated to d426affe977c
- openms_proteinresolver was updated to 851f7c252d66
- openms_psmfeatureextractor was updated to 63fea23042c4
- openms_ptmodel was updated to 3e9d04994968
- openms_qccalculator was updated to d0607dfea8fa
- openms_qcembedder was updated to f9e709333234
- openms_qcexporter was updated to 838b8e375587
- openms_qcextractor was updated to c8d22d876c75
- openms_qcimporter was updated to d29c4c46e057
- openms_qcmerger was updated to fbf1dfad22ce
- openms_qcshrinker was updated to a4b5b3c5df07
- openms_qualitycontrol was updated to bd210b86fb5d
- openms_rnadigestor was updated to c951784e4967
- openms_rnamasscalculator was updated to cb0f5beef55f
- openms_rnpxlsearch was updated to 0f97ea098da0
- openms_rnpxlxicfilter was updated to 81d5ef72ef9d
- openms_rtevaluation was updated to 062fcf33f18d
- openms_rtmodel was updated to 0fc4aa40badb
- openms_seedlistgenerator was updated to f3c72f54b9eb
- openms_semanticvalidator was updated to ff9d0d1c2c1c
- openms_sequencecoveragecalculator was updated to 3fe59b1a1370
- openms_simplesearchengine was updated to da78f97a6dda
- openms_siriusadapter was updated to 0c27444604dd
- openms_speclibcreator was updated to da1fa8ce2d96
- openms_speclibsearcher was updated to 3aa3b656e624
- openms_spectrafilterbernnorm was updated to 1a03426f3c8d
- openms_spectrafiltermarkermower was updated to 5b672697da3f
- openms_spectrafilternlargest was updated to 948d3b4988e4
- openms_spectrafilternormalizer was updated to e4f9ce9d90ad
- openms_spectrafilterparentpeakmower was updated to 5694ec584f4c
- openms_spectrafilterscaler was updated to 8de40ceef18b
- openms_spectrafiltersqrtmower was updated to 50aca42393c4
- openms_spectrafilterthresholdmower was updated to 1db101600feb
- openms_spectrafilterwindowmower was updated to 2876320b80a4
- openms_spectramerger was updated to 4333c513b7a1
- openms_spectrastsearchadapter was updated to 4d189842ebfc
- openms_svmtheoreticalspectrumgeneratortrainer was updated to 3c5de1c6c08a
- openms_targetedfileconverter was updated to 9c70a651a53e
- openms_textexporter was updated to 1b03536aa3c9
- openms_ticcalculator was updated to d623ad21ca59
- openms_tofcalibration was updated to 9f0e189d093c
- openms_transformationevaluation was updated to 76ae6a5181b5
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 87dda030bc92
- openms_xfdr was updated to 9a6e3bb0f358
- openms_xmlvalidator was updated to f036e8cf1a55
- openms_xtandemadapter was updated to 5c2a97a234d6
- syndiva was updated to 0254731f047b
ChemicalToolBox
- alphafold2 was updated to 5b85006245f3
Imaging
- overlay_moving_and_fixed_image was updated to b4fc6e09e576
- overlay_segmentation_mask was updated to 22e573b7dcb1
Annotation
- mitos2 was updated to 033755194fe9
- mlst was updated to 31812e7a1315
- spaln was updated to 2e92e1929cb1
Assembly
- verkko was updated to cf54dafa0403
FASTA/FASTQ
- bbtools_bbduk was updated to 159b04e36791
- bbtools_bbmerge was updated to c05232655d00
Mapping
- bbtools_bbmap was updated to 517464809c33
NCBI Blast
- bbtools_bbduk was updated to 159b04e36791
Nanopore
- nanoplot was updated to a3c4fe6f49ab
RNA Analysis
- kallisto_pseudo was updated to a157781cddd7
- seurat was updated to c0fd285eb553
- tetoolkit_tetranscripts was updated to 8e96d712a2bd
SAM/BAM
- samtools_coverage was updated to 8a477224dfee
Variant Calling
- bbtools_callvariants was updated to ee407fae3ccd
- smgu_frameshift_deletions_checks was updated to f079716f598c
None
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
deepTools
- deeptools_alignmentsieve was updated to 2b1413e30889
- deeptools_bam_compare was updated to 29451af70c52
- deeptools_bam_coverage was updated to 2d2cf5c1ea8a
- deeptools_bam_pe_fragmentsize was updated to 195e98217334
- deeptools_bigwig_compare was updated to 3d211717a775
- deeptools_compute_gc_bias was updated to 5be24eba848d
- deeptools_compute_matrix was updated to d9a637e83828
- deeptools_compute_matrix_operations was updated to 7ef978dc1b8a
- deeptools_correct_gc_bias was updated to 5bffaa8354a1
- deeptools_estimatereadfiltering was updated to bddbd9538b08
- deeptools_multi_bam_summary was updated to 1fcb7adc39b8
- deeptools_multi_bigwig_summary was updated to d9ce4897dbb2
- deeptools_plot_correlation was updated to 2c66e43f1c86
- deeptools_plot_coverage was updated to 9368fbc49c8b
- deeptools_plot_enrichment was updated to c03c3384cd81
- deeptools_plot_fingerprint was updated to b88ebb3672a1
- deeptools_plot_heatmap was updated to 25d830337d31
- deeptools_plot_pca was updated to 00d869ea03a1
- deeptools_plot_profile was updated to 10301d137111
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