On 2024-06-16, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #454

ChemicalToolBox

• rem_complex was updated to 60db8070a5c3

QIIME 2

• qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
• qiime2__deblur__denoise_16S was updated to b883cbea5623

Proteomics

• openms_accuratemasssearch was updated to 31e674c86840
• openms_assaygeneratormetabo was updated to f3ec820189ca
• openms_baselinefilter was updated to 84bd73e60367
• openms_clustermasstraces was updated to 3350a9c0631a
• openms_clustermasstracesbyprecursor was updated to f0c018228cec
• openms_cometadapter was updated to df0c77da6c87
• openms_consensusid was updated to 91da6dd00bbc
• openms_consensusmapnormalizer was updated to cb772fb66a49
• openms_cvinspector was updated to c8e5389abfc5
• openms_databasefilter was updated to 2f7a8b58314e
• openms_decoydatabase was updated to 06cca574e337
• openms_demeanderize was updated to 17547aceaf40
• openms_digestor was updated to 74db964d4818
• openms_dtaextractor was updated to 78024781d209
• openms_eicextractor was updated to c0f39306c687
• openms_epifany was updated to e8c52c1d6f98
• openms_erpairfinder was updated to 3d043a92c582
• openms_externalcalibration was updated to 8bdbd9b42f3e
• openms_falsediscoveryrate was updated to 4138acdeedfb
• openms_featurefindercentroided was updated to d0c5325cb998
• openms_featurefinderidentification was updated to 65bdfab68571
• openms_featurefinderisotopewavelet was updated to 1a82cbde281d
• openms_featurefindermetabo was updated to a49dde5a836e
• openms_featurefindermetaboident was updated to a93b05cf3a38
• openms_featurefindermrm was updated to ccc041d26ee1
• openms_featurefindermultiplex was updated to c9b2a5022d9e
• openms_featurelinkerlabeled was updated to 90a5563d9a69
• openms_featurelinkerunlabeled was updated to fbe41f0cc71e
• openms_featurelinkerunlabeledkd was updated to 902d0f778dcf
• openms_featurelinkerunlabeledqt was updated to 8394bcb2b0ca
• openms_fileconverter was updated to 8b6336c903ef
• openms_filefilter was updated to 86a9dd43dd09
• openms_fileinfo was updated to 5a45e6ac9aae
• openms_filemerger was updated to 0643576e7f51
• openms_fuzzydiff was updated to 5369624840b9
• openms_gnpsexport was updated to 87a970d1514b
• openms_highresprecursormasscorrector was updated to b606d4a12558
• openms_idconflictresolver was updated to 5c9e1b5d3b95
• openms_idextractor was updated to a6124b08daff
• openms_idfileconverter was updated to 5e9c35b8d194
• openms_idfilter was updated to 093a52644633
• openms_idmapper was updated to ea02403ff738
• openms_idmassaccuracy was updated to 0819fd9da302
• openms_idmerger was updated to bdcdd2a5ea43
• openms_idposteriorerrorprobability was updated to 93e6ec445d5d
• openms_idripper was updated to e64214bd2f6e
• openms_idrtcalibration was updated to f7226e34dc70
• openms_idscoreswitcher was updated to 5a56ed4fb4c2
• openms_idsplitter was updated to ae90bc9b7936
• openms_internalcalibration was updated to a1dffbb8fbc3
• openms_isobaricanalyzer was updated to 30f67afbf5be
• openms_luciphoradapter was updated to 949086930a49
• openms_mapaligneridentification was updated to 77b66c1c5415
• openms_mapalignerposeclustering was updated to e527a8a430dd
• openms_mapalignerspectrum was updated to c4c64002d01e
• openms_mapalignertreeguided was updated to 37d1f970c572
• openms_mapnormalizer was updated to 4b603a44b009
• openms_maprttransformer was updated to 317a5cb79894
• openms_mapstatistics was updated to 905a2b83fa9d
• openms_mascotadapter was updated to 087b9d721a08
• openms_mascotadapteronline was updated to 5f9e1383f6e4
• openms_masscalculator was updated to d905af02ce63
• openms_masstraceextractor was updated to 02e876ada338
• openms_metabolitespectralmatcher was updated to e46a9e72c395
• openms_metaprosip was updated to 5f72a8fa935d
• openms_mrmmapper was updated to 47f82df5bdea
• openms_mrmpairfinder was updated to e5ebdbc5e072
• openms_mrmtransitiongrouppicker was updated to 1c96645cbfbd
• openms_msfraggeradapter was updated to 907fda39b333
• openms_msgfplusadapter was updated to 810779f0cf49
• openms_msstatsconverter was updated to d0a7080ddf67
• openms_multiplexresolver was updated to 53b202a738c3
• openms_mzmlsplitter was updated to 609bc5efdcc9
• openms_mztabexporter was updated to 748dfbdf2201
• openms_noisefiltergaussian was updated to 464f7877215b
• openms_noisefiltersgolay was updated to 35468667de97
• openms_novoradapter was updated to fa544e12732f
• openms_nucleicacidsearchengine was updated to a19e844b82ad
• openms_openpepxl was updated to 10d8b43176a9
• openms_openpepxl was updated to a2a842b00f9c
• openms_openpepxllf was updated to 848df89b641a
• openms_openswathanalyzer was updated to 9cdf469a3241
• openms_openswathassaygenerator was updated to 74d39f98b0c4
• openms_openswathchromatogramextractor was updated to 92ecd10e5c03
• openms_openswathconfidencescoring was updated to e480a424b40f
• openms_openswathdecoygenerator was updated to e833a89f25c8
• openms_openswathfeaturexmltotsv was updated to 604c9363dcfd
• openms_openswathfilesplitter was updated to f8fcaa2dfd68
• openms_openswathmzmlfilecacher was updated to e7c43d17e3dc
• openms_openswathmzmlfilecacher was updated to fe39f583c19a
• openms_openswathrewritetofeaturexml was updated to 77f01ffce2b7
• openms_openswathrtnormalizer was updated to 0eaf3d4219cf
• openms_openswathworkflow was updated to ec4490c65f95
• openms_peakpickerhires was updated to 401f500aae50
• openms_peakpickeriterative was updated to 025261d4bd60
• openms_peakpickerwavelet was updated to bf0b36140329
• openms_peptideindexer was updated to 0693b186f39e
• openms_percolatoradapter was updated to 02796e3ddec1
• openms_percolatoradapter was updated to 0fc9ae55bcfc
• openms_percolatoradapter was updated to e7881a82b56d
• openms_phosphoscoring was updated to af4a55cbf5b6
• openms_precursormasscorrector was updated to b71e9103d269
• openms_proteininference was updated to e278a1abeebe
• openms_proteinquantifier was updated to 89ece0562fe0
• openms_proteinresolver was updated to c2612cb89529
• openms_psmfeatureextractor was updated to c68cd6e1d3dc
• openms_qccalculator was updated to f6f07c3e99a2
• openms_qcembedder was updated to 815e502a2288
• openms_qcexporter was updated to bb22e965eb5a
• openms_qcextractor was updated to 9a527fdadffc
• openms_qcimporter was updated to 988ae4cfb522
• openms_qcmerger was updated to 86a29d233856
• openms_qcshrinker was updated to 047c8ea82162
• openms_qualitycontrol was updated to ea02cc72f0b9
• openms_rnadigestor was updated to ef145c9fb233
• openms_rnamasscalculator was updated to 148c000ea2ec
• openms_rnpxlsearch was updated to 33e2670c3a18
• openms_rnpxlxicfilter was updated to 8ee87d58ed48
• openms_seedlistgenerator was updated to f6076d07a33a
• openms_semanticvalidator was updated to a421b4ddf47c
• openms_sequencecoveragecalculator was updated to b5348eebc36c
• openms_simplesearchengine was updated to a1724438d580
• openms_siriusadapter was updated to b7505ec60b7d
• openms_speclibcreator was updated to 5b237d23cb7d
• openms_speclibsearcher was updated to 2d6e49acbb56
• openms_spectrafilterbernnorm was updated to cdc1cdb2ad70
• openms_spectrafiltermarkermower was updated to b4f6792e0b22
• openms_spectrafilternlargest was updated to 503e18eb2596
• openms_spectrafilternormalizer was updated to 4ba7fb47318c
• openms_spectrafilterparentpeakmower was updated to 2199afa87e7d
• openms_spectrafilterscaler was updated to f714192eab03
• openms_spectrafiltersqrtmower was updated to 241875955167
• openms_spectrafilterthresholdmower was updated to 53fec73970ad
• openms_spectrafilterwindowmower was updated to da5c2d11fcb8
• openms_spectramerger was updated to b20b1f195cf2
• openms_spectrastsearchadapter was updated to 52dd59548339
• openms_targetedfileconverter was updated to 43b9ed22e8ce
• openms_textexporter was updated to b5de4c3efbdd
• openms_ticcalculator was updated to 5f36444a0f9d
• openms_tofcalibration was updated to b6f7cec6cc9e
• openms_xfdr was updated to 81402a5e4173
• openms_xfdr was updated to 9a6e3bb0f358
• openms_xfdr was updated to cf9b51c0b15e
• openms_xmlvalidator was updated to ad2ba3a95a02
• openms_xtandemadapter was updated to 567de7cb1766

SAM/BAM

• sambamba_flagstat was updated to ce3927af5a8f
• sambamba_markdup was updated to 6c916a5a6afb
• sambamba_merge was updated to 480c9d4c8957
• sambamba_sort was updated to 87c1b543c4c4