On 2024-07-31, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #464
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
- qiime2__deblur__denoise_16S was updated to b883cbea5623
Proteomics
- openms_openpepxl was updated to 40cc19c0dbd6
- openms_openpepxl was updated to a2a842b00f9c
- openms_openpepxl was updated to fc36cfd19834
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
Machine Learning
- sklearn_fitted_model_eval was updated to c2a7717d96ce
Annotation
- cpt_genome_editor was updated to 78ce8a1a8fd1
Assembly
- unicycler was updated to 3e44ef016b45
Evolution
- iqtree was updated to 111bd54f6bc4
FASTA/FASTQ
- rasusa was updated to add156116c63
- seqkit_sort was updated to 61eb4cfc7313
- seqkit_translate was updated to 6366952ddfd3
- cutadapt was updated to 5eb7e84243f2
Metagenomic Analysis
- mg_toolkit_original_metadata was updated to 2eef3b6f1c84
Phylogenetics
- hyphy_prime was updated to 4072360120e4
RNA Analysis
- qualimap_counts was updated to 72927fc9e9ed
- qualimap_rnaseq was updated to 35e00077ba61
SAM/BAM
- qualimap_bamqc was updated to 30a201c9c310
- qualimap_multi_bamqc was updated to 17b35d23731f
Variant Calling
- bcftools_annotate was updated to 95815a0bb307
- bcftools_cnv was updated to 143796b504eb
- bcftools_concat was updated to abd489215f73
- bcftools_consensus was updated to 1171446da5db
- bcftools_convert_from_vcf was updated to d58d2e8c7a57
- bcftools_convert_to_vcf was updated to 7291189e98b4
- bcftools_csq was updated to e6f4badbe6f3
- bcftools_filter was updated to 5d6653c989cb
- bcftools_gtcheck was updated to 91c1e57d5c7f
- bcftools_isec was updated to 15da1ddcfeff
- bcftools_merge was updated to b84fda8ebef0
- bcftools_mpileup was updated to 56556e1267de
- bcftools_norm was updated to 1ca7418e46ee
- bcftools_plugin_color_chrs was updated to ee85030e893d
- bcftools_plugin_frameshifts was updated to 2e303fcd3b0c
- bcftools_plugin_setgt was updated to 681bdf1e22ff
- bcftools_plugin_split_vep was updated to b317ccd39088
- bcftools_query was updated to fdec14f69010
- bcftools_reheader was updated to 3b7b1fe7b937
- bcftools_roh was updated to 1a989b4110da
- bcftools_stats was updated to bf8325a07ce7
- bcftools_view was updated to c2ab91a0d506
- beacon2_analyses was updated to 5fcaabf17d8d
- beacon2_biosamples was updated to 7cea4f9c4d8f
- beacon2_bracket was updated to 2e60de9f5046
- beacon2_cnv was updated to 25424cc216f9
- beacon2_cohorts was updated to 8fc2c603a61f
- beacon2_datasets was updated to a38d4a52dbff
- beacon2_gene was updated to 8e949a739eaa
- beacon2_import was updated to 0f85ad162439
- beacon2_individuals was updated to b648eb72552c
- beacon2_range was updated to 2a9895689973
- beacon2_runs was updated to 34814a1b0a3f
- beacon2_sequence was updated to ad5a4a77ca9d
- cnv_vcf2json was updated to 7d2d2e3b9891
None
- data_manager_build_kraken2_database was updated to 1e34d2e3d285
- data_manager_build_kraken2_database was updated to 539b008cfe1c
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
hca_sc_scmap_tools
- scmap_get_std_output was updated to 45cd8de0d44d
- scmap_index_cell was updated to c17b3c6c1e31
- scmap_index_cluster was updated to 9cc085052dc2
- scmap_preprocess_sce was updated to 62513698ee34
- scmap_scmap_cell was updated to 32ae4a600167
- scmap_scmap_cluster was updated to 3f16a94610df
- scmap_select_features was updated to 836661f50897
hca_sc_label_analysis_tools
- decoupler_pseudobulk was updated to 93f61ea19336
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