On 2024-08-25, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #471
Text Manipulation
- column_maker was updated to aff5135563c6
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
- qiime2__deblur__denoise_16S was updated to b883cbea5623
Variant Calling
- bcftools_annotate was updated to 2c372041ed8c
- bcftools_call was updated to 07396b423218
- bcftools_cnv was updated to ccb83bf54de0
- bcftools_concat was updated to 05f317e50e61
- bcftools_consensus was updated to 8aa352093d73
- bcftools_convert_from_vcf was updated to 012656fd329f
- bcftools_convert_to_vcf was updated to cfd81f17580b
- bcftools_csq was updated to d237eaef451f
- bcftools_filter was updated to 46fcafba49ec
- bcftools_gtcheck was updated to 7b4454382d39
- bcftools_isec was updated to 39bca000353d
- bcftools_merge was updated to 5b006286a458
- bcftools_norm was updated to 271965b55437
- bcftools_plugin_color_chrs was updated to 7d9166ecd10f
- bcftools_plugin_frameshifts was updated to b03c0b3e67a6
- bcftools_plugin_setgt was updated to a730269af659
- bcftools_plugin_split_vep was updated to 7b71281eb0ca
- bcftools_query was updated to 31a1b89eab9b
- bcftools_reheader was updated to 2331ddcbd5aa
- bcftools_roh was updated to fa65af07ce7d
- bcftools_stats was updated to 591cc8518033
- bcftools_view was updated to 1a2ef636f48e
- beacon2_analyses was updated to 2e057dfe494c
- beacon2_biosamples was updated to 5fedf42a718b
- beacon2_bracket was updated to 3347fc9c43bf
- beacon2_cnv was updated to 398000f8de7d
- beacon2_cohorts was updated to d524bd42b89e
- beacon2_datasets was updated to 1f9f549aa9ca
- beacon2_gene was updated to 9135f3e914b7
- beacon2_import was updated to d2646a23f6b2
- beacon2_individuals was updated to 72d8cb0fa73f
- beacon2_range was updated to 5bb5861b37b6
- beacon2_runs was updated to 016fc58daa80
- beacon2_sequence was updated to 4818fff6105d
Proteomics
- openms_openpepxl was updated to 40cc19c0dbd6
- openms_openpepxl was updated to a2a842b00f9c
- openms_openpepxl was updated to fc36cfd19834
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
- prot_scriber was updated to f05dfa43240f
Convert Formats
- graphicsmagick_image_compare was updated to cfe1d6e23237
- graphicsmagick_image_convert was updated to 3ae9331790a6
- graphicsmagick_image_montage was updated to 3e81299dfce3
Imaging
- cellpose was updated to 9186100e75b5
Machine Learning
- chatgpt_openai_api was updated to dab494dce303
Multiple Alignments
- mafft was updated to 8e649f27aa0d
None
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
- data_manager_omamer was updated to e1502e4f8725
Evolution
- iqtree was updated to 0878b7fd5260
FASTA/FASTQ
- ncbi_fcs_gx was updated to c228e49365c4
Metagenomic Analysis
- dram_annotate was updated to df8dac817fc8
- dram_distill was updated to e12898633ceb
- dram_merge_annotations was updated to ca2c752a22e4
- dram_neighborhoods was updated to 877bdba8fc5d
- dram_strainer was updated to f081f73cc0be
- humann2_barplot was updated to 56cb2b0269d1
- virannot_blast2tsv was updated to 77c3ef9b0ed7
- virannot_otu was updated to 735a21808348
- virannot_rps2tsv was updated to fd7104249a3c
Phylogenetics
- hyphy_annotate was updated to ec59f7a36a24
- hyphy_prime was updated to 4072360120e4
RNA Analysis
- brew3r_r was updated to 3198f52bffaa
- cemitool was updated to 9d93999d9028
- locarna_multiple was updated to 6e20ad2c8752
Single-cell
- scanpy_cluster_reduce_dimension was updated to f9353ee6a0d4
- scanpy_filter was updated to 72a6bebab2a5
- scanpy_inspect was updated to c0a80a16560f
- scanpy_normalize was updated to 9f354c7c8c92
- scanpy_plot was updated to 1072ce66b426
- scanpy_remove_confounders was updated to a39040ae0a38
Statistics
- clustering_from_distmat was updated to c0b01c55a0e0
Metabolomics
- tracegroomer was updated to ea6ea4029c47
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