On 2024-10-13, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #481
Species abundance
- pampa_presabs was updated to 8d8aec182fb1
Graph/Display Data
- ggplot2_point was updated to a36551483a8f
Metabolomics
- matchms_metadata_export was updated to 8ff29dee9f26
- matchms_metadata_match was updated to 43d40415654c
- matchms_metadata_match was updated to 8a6bcc83171a
- matchms_networking was updated to 7c9599ecc2d3
Machine Learning
- sklearn_clf_metrics was updated to 15bcf1a7543b
- sklearn_data_preprocess was updated to 50b3e080cef0
- sklearn_data_preprocess was updated to add3c3a7c2b4
- sklearn_ensemble was updated to 4ecc0ce9d0a2
- sklearn_ensemble was updated to d868914bce73
- sklearn_feature_selection was updated to a7c667ff83fe
- sklearn_feature_selection was updated to ae0fafb53c1d
- sklearn_feature_selection was updated to ec25331946b8
- sklearn_generalized_linear was updated to c648d0716fb0
- sklearn_label_encoder was updated to 026ff1ea9f94
- sklearn_regression_metrics was updated to a152c1d23379
- sklearn_sample_generator was updated to 6b14fe097541
- sklearn_stacking_ensemble_models was updated to 2b679bb676be
RAD-seq
- stacks_stats was updated to 3c4c922a4fb0
Data Managers
- checkv_end_to_end was updated to e523d50513a4
- vibrant_build_database was updated to 200343b50d46
- virsorter_build_database was updated to 863ba94fb6e4
Metagenomic Analysis
- kraken_report was updated to 1902d3de4a4f
- extract_metaphlan_database was updated to 4b6ac1f0042b
- virsorter was updated to 76a7de225f06
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
- qiime2__deblur__denoise_16S was updated to b883cbea5623
ChemicalToolBox
- gmx_fep was updated to 19d1d4c30402
- gmx_merge_topology_files was updated to 33ed3c26b8c2
- gmx_merge_topology_files was updated to 930a403f7389
- gmx_sim was updated to 4c4f1761d31f
- gmx_sim was updated to 633f27174e8f
- gmx_sim was updated to b1061cc2653a
- gmx_trj was updated to b4705476229d
Proteomics
- eggnog_mapper was updated to a37df6f6b869
- hardklor was updated to 539f157784e7
- metaquantome_sample was updated to 40ca115438d2
- openms_clustermasstracesbyprecursor was updated to f61e132c4536
- openms_featurefindersuperhirn was updated to c42075bb5123
- openms_fuzzydiff was updated to ed9a839cbbda
- openms_maprttransformer was updated to fd6de4cdb9e9
- openms_nucleicacidsearchengine was updated to 00b91aaec050
- openms_rnpxlsearch was updated to 3dc6d9795d5b
- openms_ticcalculator was updated to 32667824b653
Nanopore
- nanopolish_eventalign was updated to 5c360c46eac7
BED
- bedtools was updated to 6bb3cd018203
FASTA/FASTQ
- ncbi_fcs_gx was updated to ed1ef564da41
Genome Diversity
- fasttree was updated to ef46a404db96
Mapping
- bwameth was updated to b4e6819b25ef
- star_fusion was updated to 0b44456754e2
Mothur
- mothur_chimera_check was updated to 4b57c3241cbc
- mothur_get_coremicrobiome was updated to 42244e3619cf
- mothur_get_otulabels was updated to b847275dfdf2
- mothur_remove_lineage was updated to 2a4d6c3d9b6d
RNA Analysis
- slamdunk was updated to 24657d5edede
- graphprot_predict_profile was updated to 7bbb7bf6304f
Variant Calling
- sansa_annotate was updated to 7ca2fba4be83
Virology
- freyja_aggregate_plot was updated to 948903a8555d
- freyja_boot was updated to 95e88f407e86
- freyja_demix was updated to 53b22b7dff19
- ivar_consensus was updated to 17f911830a8c
None
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
deepTools
- deeptools_alignmentsieve was updated to e5a296ce8fbb
hca_sc_utils_viz
- dropletutils_read_10x was updated to d62a9aa0411e
hca_sc_label_analysis_tools
- decoupler_pseudobulk was updated to f321c60167d4
Apollo
- apollo_create_account was updated to a46a509386d3
Phylogenetics
- t_coffee was updated to c67bd5acbae2
Get Data
- ensembl_get_sequences was updated to 0fa1d1cc417d
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