On 2024-11-17, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #487

Metabolomics

• matchms_add_key was updated to a5d41764722d
• matchms_convert was updated to 9e83636da9d3
• matchms_filtering was updated to 83c4b4359ac4
• matchms_fingerprint_similarity was updated to fd890f162ce6
• matchms_formatter was updated to a5a5b147da70
• matchms_metadata_export was updated to 8832425b1ff6
• matchms_metadata_match was updated to 330b0dfae8da
• matchms_metadata_merge was updated to 1fd950c5586a
• matchms_networking was updated to f04b378325e5
• matchms_remove_key was updated to fbdb2ae524df
• matchms_remove_spectra was updated to d50ce2f51fc0
• matchms_spectral_similarity was updated to 7ba589b01dbc
• matchms_split was updated to ea6c5636c0cf
• matchms_subsetting was updated to 5bbd1a8404f5

QIIME 2

• qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
• qiime2__deblur__denoise_16S was updated to b883cbea5623

Machine Learning

• sklearn_clf_metrics was updated to 15bcf1a7543b

Assembly

• pretext_graph was updated to 408ece2e4647
• pretext_map was updated to 511e5e3cd55e
• pretext_map was updated to c6cec5ab35c1
• quast was updated to a3b35edea53a

Annotation

• tbprofiler was updated to 8cb134b8c1a5

FASTA/FASTQ

• fastp was updated to a626e8c0e1ba

Filter and Sort

• bigwig_outlier_bed was updated to bae6cba73e32

Genome Diversity

• fasttree was updated to ef46a404db96

Get Data

• fastq_dl was updated to 5e7401777990

Graph/Display Data

• pretext_snapshot was updated to 26f2fe7e53a1

Metagenomic Analysis

• ampvis2_alpha_diversity was updated to bd518ee51da5
• ampvis2_boxplot was updated to 5e4e2b612a4f
• ampvis2_core was updated to 2bbf288d6334
• ampvis2_core was updated to e595eafb5ecf
• ampvis2_export_fasta was updated to 0cce683798d3
• ampvis2_export_fasta was updated to 3fd332f614f3
• ampvis2_frequency was updated to ac3774320d28
• ampvis2_heatmap was updated to c980e4bd48f2
• ampvis2_load was updated to 576dd33588bf
• ampvis2_load was updated to 738474880da8
• ampvis2_merge_ampvis2 was updated to 2f9731cc4c87
• ampvis2_merge_ampvis2 was updated to 378ce300fb3d
• ampvis2_mergereplicates was updated to 1f6f3bc6edd1
• ampvis2_mergereplicates was updated to f34ea612eecf
• ampvis2_octave was updated to 33087ecbd8f4
• ampvis2_ordinate was updated to 7825694588d6
• ampvis2_otu_network was updated to 454bfdfa6de5
• ampvis2_otu_network was updated to bb054c50a96c
• ampvis2_rankabundance was updated to 18de61c5527c
• ampvis2_rankabundance was updated to cf0944377d87
• ampvis2_rarecurve was updated to 094d0b97f92c
• ampvis2_setmetadata was updated to a9dacd650ad5
• ampvis2_subset_samples was updated to f9fa155c191f
• ampvis2_subset_samples was updated to ff07f41b8e54
• ampvis2_subset_taxa was updated to 76cb398e9110
• ampvis2_timeseries was updated to bd41251e42ec
• ampvis2_venn was updated to bbb4a531d80b
• ampvis2_venn was updated to f28f2faad83b
• polypolish was updated to 915637bd1d1a

Multiple Alignments

• trimal was updated to ebe28cac8d8b

Phylogenetics

• hyphy_bgm was updated to a54340ea0866

Variant Calling

• sniffles was updated to ceff2f6a5368

Virology

• freyja_aggregate_plot was updated to 54acd5139cab
• freyja_boot was updated to 16331f8cff98
• freyja_demix was updated to c5f2ce99da69
• freyja_variants was updated to d17f930148a5
• snipit was updated to 877e80114d25

None

• data_manager_build_kraken2_database was updated to e9ee4d074d5d
• data_manager_diamond_database_builder was updated to 4a08b7b76b78

RNA Analysis

• infernal was updated to 1d74ed49cf41

XAS (X-ray Absorption Spectroscopy)

• larch_artemis was updated to e0407f36fcea
• larch_athena was updated to 6e94ae7d1ca1
• larch_criteria_report was updated to aa9cb2b42741
• larch_feff was updated to 8ee492af5586
• larch_lcf was updated to 90a69f15ab92
• larch_plot was updated to 0339eb694129
• larch_select_paths was updated to 204c4afe2f1e