On 2024-11-24, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #488

Get Data

• copernicusmarine was updated to c07f11d8e49a

Metagenomic Analysis

• krakentools_alpha_diversity was updated to 78b69342c280
• krakentools_beta_diversity was updated to 4505d7643673
• krakentools_combine_kreports was updated to 3d2cffa2c4ab
• krakentools_extract_kraken_reads was updated to 4bf1e2701504
• krakentools_kreport2krona was updated to 02bbace216f2
• krakentools_kreport2mpa was updated to d33cf727ed94
• checkv_build_database was updated to 88042a5ead89

Data Managers

• genomad_build_database was updated to c4ec3d81eeee
• vibrant_build_database was updated to 3f68072f2da6
• virsorter_build_database was updated to 863ba94fb6e4

QIIME 2

• qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
• qiime2__deblur__denoise_16S was updated to b883cbea5623

fetch_sequences___alignments

• extract_genomic_dna was updated to 80414c33a59a

Assembly

• blobtoolkit was updated to 392811378515
• abyss was updated to db9b10824c61

Machine Learning

• black_forest_labs_flux was updated to 21ee409e6cde

Imaging

• cp_cellprofiler4 was updated to 9799fc53433e

FASTA/FASTQ

• bbtools_bbduk was updated to d58c27d2c5a7
• bbtools_bbmerge was updated to 1bb2b5b52030
• bbtools_tadpole was updated to ce13b4678f18
• ncbi_fcs_gx was updated to 32d058f3462a

Gemini

• gemini_annotate was updated to 8da05bf2b1d1

Genome Diversity

• fasttree was updated to ef46a404db96

Mapping

• bbtools_bbmap was updated to 8015d7ab8357

Multiple Alignments

• trimal was updated to e379c0202766

Variant Calling

• bbtools_callvariants was updated to 3854db061e6e
• ensembl_vep was updated to c91e09b60325

None

• data_manager_diamond_database_builder was updated to 4a08b7b76b78

RNA Analysis

• infernal was updated to 3711f654044e