On 2025-02-09, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #499
Graph/Display Data
- histogram was updated to d0b9dd19e919
GIS Data Handling
- aquainfra_ogc_api_processes was updated to af00a67d3649
Proteomics
- bioconductor_scp was updated to cd2f3a280463
Metabolomics
- gem_check_memote was updated to 927af80d5e38
- gem_escher_visualization was updated to b79cf44068bc
- gem_extract_exchange was updated to d9893d41dd6a
- gem_flux_distribution was updated to 1c71660496fb
- bioconductor_msnbase_centroid was updated to 4018639dc0a5
- bioconductor_msnbase_smooth_chromatogram was updated to 492350f45be9
- bioconductor_msnbase_smooth_mz was updated to 00e058234fbf
- table_pandas_arithmetics was updated to d4bacc06365e
- table_pandas_rename_column was updated to 3f54cd56a65e
- table_pandas_rename_columns_regex was updated to 505a8e975968
- table_pandas_transform was updated to b722dba91064
- table_scipy_interpolate was updated to 0112f08c95ed
Imaging
- omero_get_id was updated to c7b2650718fe
- omero_get_value was updated to ecb13e93fae2
Statistics
- saqc was updated to 55bbea0cdc60
Text Manipulation
- xlsx2tsv was updated to a21347be425d
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
- qiime2__deblur__denoise_16S was updated to b883cbea5623
FASTA/FASTQ
- gfastats was updated to 7729cd89aaf7
- bbtools_bbnorm was updated to e607b61a68ad
- fastp was updated to 10678d49d39e
- seqkit_fx2tab was updated to 13e101f5bb5d
- seqkit_head was updated to 3c0120a0e35c
- seqkit_locate was updated to 54e818ea7c4d
- seqkit_sort was updated to 3dc878f71e4d
- seqkit_stats was updated to 70b975dca7b4
- seqkit_translate was updated to f917a77055f5
- cutadapt was updated to c0b2c2e39c9c
Annotation
- hicexplorer_hicbuildmatrixmicroc was updated to bce0ab313a89
- ppanggolin_all was updated to 6fdee3720de7
- ppanggolin_msa was updated to d305623d5f41
Mapping
- minimap2 was updated to 66367287b4e6
- pbmm2 was updated to 4436bcb33d39
Metagenomic Analysis
- binette was updated to 6641160f2053
- biobox_add_taxid was updated to 2e0af1e2d487
- cami_amber was updated to 319b8aac032d
- cami_amber_add was updated to 741babee7bb3
- cami_amber_convert was updated to 40d5ea45b73f
- fairy_cov was updated to 8a9a425f5c60
- fairy_sketch was updated to 17d174efa4be
- phyloseq_add_rank_names was updated to d34e74e40d60
- phyloseq_from_biom was updated to 847f433f202b
- phyloseq_from_dada2 was updated to 0b9d4ec77c4f
- phyloseq_plot_bar was updated to 94563110275d
- phyloseq_plot_ordination was updated to bbd9d1022144
- phyloseq_plot_richness was updated to d6cbeb48294d
Multiple Alignments
- mummer_delta_filter was updated to 5c7e6ef78006
- mummer_dnadiff was updated to 29662f643859
- mummer_mummer was updated to b7bc272143fb
- mummer_mummerplot was updated to 029a793f39b6
- mummer_nucmer was updated to 27fff8d3793e
- mummer_show_coords was updated to 4c89814871e8
NCBI Blast
- diamond was updated to 60f307965815
Nanopore
- nanoplot was updated to 2a9afed42353
Phylogenetics
- ete_treeviewer was updated to 2d4402c70eed
RNA Analysis
- cemitool was updated to 51a3b375b7b8
Single-cell
- mudata_import_export was updated to 089a6101d5d9
- plot_muon was updated to 36f2cd69d20e
- preprocess_muon was updated to 678260997e94
None
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
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