On 2025-09-21, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #531

Metagenomic Analysis

• gtdbtk_classify_wf was updated to 53691cc6af0f
• data_manager_defense_finder was updated to 502208b90cfe
• defense_finder was updated to 71e221c4906c
• phi_toolkit_report was updated to 3a7f73d638ba

QIIME 2

• qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
• qiime2__deblur__denoise_16S was updated to b883cbea5623

Annotation

• coreprofiler_allele_calling was updated to e8d24431ea66
• panta was updated to b388b2368c7e
• ppanggolin_all was updated to ce6377ab5aca
• ppanggolin_msa was updated to e4655e5995b6
• ppanggolin_projection was updated to 9793cffbe11e
• ppanggolin_rarefaction was updated to a606074ba5f8

Assembly

• pairtools_dedup was updated to 52c601d961b6
• pairtools_parse was updated to 987ed7d8e152
• pairtools_sort was updated to a04537c14c07
• pairtools_split was updated to 9bbff7ee1077
• pairtools_stats was updated to 0c303ccc6cd5
• yahs was updated to 6756b34312cd

FASTA/FASTQ

• rrmscorer was updated to 02b0e0f78d8a

Graph/Display Data

• volcanoplot was updated to cfb0595f9842

Mothur

• mothur_pca was updated to 74d1b765843b

Quality Control

• sequali was updated to 52c07e141113

Variant Calling

• cutesv was updated to 278efc44f61a
• delly_lr was updated to 7bd397ff21a2
• ensembl_vep was updated to 227838fa7fa6

None

• data_manager_diamond_database_builder was updated to 4a08b7b76b78