On 2025-12-21, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #544

QIIME 2

• qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
• qiime2__deblur__denoise_16S was updated to b883cbea5623

RNA Analysis

• deseq2 was updated to 2275d0688bca

Phenotype Association

• gwas_quality_control_plink was updated to 24b821ead589

Convert Formats

• ffmpeg_converter was updated to 62f5a8b130db

Annotation

• psortb was updated to b97ecda36fc4
• coreprofiler_allele_calling was updated to 49416e22e6da

Imaging

• 2d_feature_extraction was updated to 6a2b26c297a4
• 2d_simple_filter was updated to 59e9798010ce
• bioformats2raw was updated to d7e5cf35577d
• color_deconvolution was updated to 0cbdf78fee14
• iscc_sum was updated to 7d2c95a58897
• iscc_sum_similarity was updated to a9659266d0fc
• iscc_sum_verify was updated to fe0c92fe6f66
• landmark_registration was updated to a7a21b7ac7b4
• mahotas_features was updated to e26894daf0a0
• overlay_images was updated to bc4cf90cfc3b
• permutate_axis was updated to 119863c974b3
• rfove was updated to 81b246085378
• ridge_filter was updated to a683c87ec261
• superdsm was updated to 30d88f083ae9

Collection Operations

• unzip was updated to 06eac2d1a8a9

None

• data_manager_build_coreprofiler was updated to 45c8bfaab608
• data_manager_diamond_database_builder was updated to 4a08b7b76b78

Assembly

• shovill was updated to 331109486d58

Mapping

• kma was updated to 8fbd98f37c10

Metagenomic Analysis

• bmtagger was updated to 49a1cbbe5767
• dada2_assigntaxonomyaddspecies was updated to 9f306361a58e
• dada2_dada was updated to 47198090501e
• dada2_filterandtrim was updated to e8768ddeba32
• dada2_learnerrors was updated to dd6572434618
• dada2_makesequencetable was updated to 88677f452aea
• dada2_mergepairs was updated to 273b8a00c8a2
• dada2_plotcomplexity was updated to 224abe7c80ed
• dada2_plotqualityprofile was updated to e7c2674e01fe
• dada2_primercheck was updated to 7dfcb39313d4
• dada2_removebimeradenovo was updated to 4efeb75704c8
• dada2_seqcounts was updated to 213a3fda0b91