On 2026-04-25, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #580
Machine Learning
- keras_batch_models was updated to 3b8fa4ea9727
- keras_model_builder was updated to fe0e82a7d0ee
- keras_model_config was updated to 00d1889e9ecc
- keras_train_and_eval was updated to 31f6bf2382dc
- llm_hub was updated to d7551996b4a3
- ml_visualization_ex was updated to 1d2a478bb514
- model_prediction was updated to b6c2289292fa
- rag_retriever was updated to 733bde6b986b
- sklearn_build_pipeline was updated to 43a859a0fab5
- sklearn_clf_metrics was updated to 048d7bd59326
- sklearn_data_preprocess was updated to dde13d557dc4
- sklearn_discriminant_classifier was updated to dea38330b78a
- sklearn_ensemble was updated to 00f01f713c3c
- sklearn_estimator_attributes was updated to 0a43c856e1d8
- sklearn_feature_selection was updated to 5bcf779d901f
- sklearn_fitted_model_eval was updated to e8694d796a7e
- sklearn_generalized_linear was updated to 57938c2f6ef5
- sklearn_label_encoder was updated to ac52a5916963
- sklearn_lightgbm was updated to 16c442ecd6bf
- sklearn_model_fit was updated to a293d7937700
- sklearn_model_validation was updated to 7e5631773cea
- sklearn_nn_classifier was updated to 900c42c3eef4
- sklearn_numeric_clustering was updated to 1bdac8249aa1
- sklearn_pairwise_metrics was updated to 3ff43fbb7ccf
- sklearn_pca was updated to fbf485fc2d30
- sklearn_regression_metrics was updated to c78a5fc9e758
- sklearn_sample_generator was updated to 6cf2a66c46f1
- sklearn_searchcv was updated to f484f41ea0dd
- sklearn_svm_classifier was updated to 4aa3666b66fa
- sklearn_to_categorical was updated to f86c0419af43
- sklearn_train_test_eval was updated to 418cafc53f8e
- sklearn_train_test_split was updated to e8e5736b632d
- tabpfn was updated to cc50a058a1cb
- tabpfn was updated to ec6df5e22055
- tabpfn was updated to f0c7f0bad621
Statistics
- scipy_sparse was updated to 602b5fb7ef09
DNA Metabarcoding
- obi_annotate was updated to 6c19e0d33cf6
- obi_clean was updated to 656858ba54ea
- obi_convert was updated to ce363293cb55
- obi_grep was updated to be475ac055b2
- obi_multiplex was updated to 2ede910f04e1
- obi_pairing was updated to 704f9a5e5c91
- obi_uniq was updated to c89bb0ef8f25
Computer Vision
- sam3_semantic_segmentation was updated to 0f56f5f6bc3f
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
- qiime2__deblur__denoise_16S was updated to b883cbea5623
Assembly
- minipolish was updated to 45d0307149b4
- shovill was updated to eb04ae2c1f21
Graph/Display Data
- wordcloud was updated to 45c4cc885ddb
Imaging
- coco2labelme was updated to 06a8da74643e
- parse_image_metadata was updated to 96771bf8ed2f
Evolution
- iqtree was updated to e727e82945af
FASTA/FASTQ
- fastp was updated to 241decaaff3e
- rasusa was updated to 98b25bd0a0b6
Mapping
- kma was updated to 7da532cd050c
Metagenomic Analysis
- ampvis2_alpha_diversity was updated to b0b7bba11507
- ampvis2_boxplot was updated to 69cce076e0cf
- ampvis2_core was updated to 96bc42baaa74
- ampvis2_export_fasta was updated to 61aa0f3b4d74
- ampvis2_export_otu was updated to cf9417375842
- ampvis2_frequency was updated to e0b095891b28
- ampvis2_heatmap was updated to 3e5c1fdd0e45
- ampvis2_load was updated to 27ac516ba719
- ampvis2_merge_ampvis2 was updated to 24f43b62a172
- ampvis2_mergereplicates was updated to 77f9ed2bb200
- ampvis2_octave was updated to d5edda7f75eb
- ampvis2_ordinate was updated to 9742e8636a10
- ampvis2_otu_network was updated to a9fd4ada4d2a
- ampvis2_rankabundance was updated to 4140e26cafbc
- ampvis2_rarecurve was updated to 2828d52a8910
- ampvis2_setmetadata was updated to 638503db7271
- ampvis2_subset_samples was updated to 492eb6dcfe5c
- ampvis2_subset_taxa was updated to bc02fbdb3510
- ampvis2_timeseries was updated to d50cf42420f2
- ampvis2_venn was updated to 49bd53fa8f8d
- gtdbtk_classify_wf was updated to ed4c007af906
- mgnify_pipelines_toolkit_classify_var_regions was updated to ac58b06d1721
- mgnify_pipelines_toolkit_make_asv_count_table was updated to 75c19e6b2fbc
- mgnify_pipelines_toolkit_mapseq_to_asv_table was updated to c1811fa799a0
- mgnify_pipelines_toolkit_permute_primers was updated to d553befadd34
- mgnify_pipelines_toolkit_primer_val_classification was updated to 5d60fd8e0723
- mgnify_pipelines_toolkit_rev_comp_se_primers was updated to 19e63ae9ec81
RNA Analysis
- seurat_clustering was updated to b70382a113e1
- seurat_create was updated to b9e7b804ec67
- seurat_data was updated to f04c81e68e86
- seurat_integrate was updated to 7c728a178c4d
- seurat_plot was updated to 6154937135c7
- seurat_preprocessing was updated to 5d5fe5659252
- seurat_reduce_dimension was updated to 54ee3884e7ca
SAM/BAM
- samtools_slice_bam was updated to c4325d32b1a2
- samtools_sort was updated to 2ce517eb9af2
- samtools_ampliconclip was updated to d2f176e331ef
- samtools_fastx was updated to 4bde991b8037
- samtools_fixmate was updated to 2f395ebff85f
- samtools_markdup was updated to a50321bc1a90
- samtools_merge was updated to 37c8eb55315d
Single-cell
- anndata_export was updated to d99a178d1ab5
- anndata_import was updated to d9ae58b926fc
- anndata_inspect was updated to b26b87f5a13c
- anndata_manipulate was updated to 9ef202055d5c
- modify_loom was updated to 0ee9395e1eb2
None
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
- data_manager_mapseq was updated to 4cd97cc67061
- data_manager_mapseq was updated to a0d77af1d226
- data_manager_mapseq was updated to dbf2735e8480
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