On 2026-06-19, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #591
GIS Data Handling
- aquainfra_ogc_api_processes was updated to cc99eeaa9a49
Population Genomics
- dapc_kmeans was updated to 4ca700803d75
- effective_population_size_ld_method was updated to ecee96169b7c
- lea_snmf_application was updated to 8dadc1127183
- population_genetics_stats was updated to cd9b7f57a163
Metabolomics
- matchms_add_key was updated to 69b568a0dab1
- matchms_convert was updated to d95450eba471
- matchms_filtering was updated to a26afcf352fd
- matchms_fingerprint_similarity was updated to a465cb84a388
- matchms_formatter was updated to 5ab06f9104ec
- matchms_metadata_export was updated to 67b885502624
- matchms_metadata_match was updated to 9c9af0df1754
- matchms_metadata_merge was updated to fda20b5ff8ed
- matchms_networking was updated to ad859b8036ad
- matchms_remove_key was updated to 9843a619e9be
- matchms_remove_spectra was updated to 27e068d0d89a
- matchms_spectral_similarity was updated to 931cce430163
- matchms_split was updated to 9e931f6fc8cd
- matchms_subsetting was updated to 0da72f66ff79
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
- qiime2__deblur__denoise_16S was updated to b883cbea5623
Assembly
- mitohifi was updated to 2853471f753d
- rnaspades was updated to aa1ac2f7a688
- spades_biosyntheticspades was updated to afac6d6bd02b
- spades_coronaspades was updated to 045c8498d2dd
- spades_metaplasmidspades was updated to ae96f644b722
- spades_metaviralspades was updated to c4ba6aa27088
- spades_plasmidspades was updated to 6fb81bb0fe3e
- spades_rnaviralspades was updated to f4fc734dd9b0
- metaspades was updated to 04d81e5f25e9
- spades was updated to 1f04936b96f3
Annotation
- kat_cold was updated to 2ad6adc8d45f
- kat_filter_kmer was updated to 6410f0530bc7
- kat_filter_seq was updated to 9dfc749e8eed
- kat_sect was updated to bf55d2b3728c
- flavotyper was updated to ef06acb676b4
- mirmachine was updated to 9c7074f01f52
- staramr was updated to cfe8742b704e
- tiberius was updated to 0f10ac29126a
Graph/Display Data
- jbrowse2 was updated to dd032687675c
- bandage was updated to 86ec2f06de3c
Imaging
- coco2labelme was updated to 3a9709a4df77
- coco_annotation_visualizer was updated to 7b390f574967
- edit_coco_annotation was updated to b702f65d511e
- json2yolosegment was updated to fe95917c3e20
- yolo_predict was updated to 3e9d14e5942f
- yolo_training was updated to 5cc588ef3793
Machine Learning
- llm_hub was updated to 36d65981163b
- image_learner was updated to 6b5934d4c7a9
- multimodal_learner was updated to 9649a6aa6997
- tabular_learner was updated to efe3a2d3a31d
FASTA/FASTQ
- barcode_splitter was updated to eb95cc17426d
- falco was updated to 219ffa24f789
Get Data
- ncbi_datasets was updated to c28c9cdf3660
Mapping
- bwa was updated to c598cbb8b019
None
- amrfinderplus_data_manager_build was updated to 5a6e1fa871a2
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
Nanopore
- chopper was updated to aa73f04777fd
Spatial Omics
- squidpy_graph was updated to 662e929f44fa
- squidpy_plot was updated to 0a089e4b62d7
Variant Calling
- bcftools_norm was updated to 5226c31ac6d3
- ensembl_vep was updated to c8ecdd5bdb32
Metagenomic Analysis
- lotus2 was updated to 869256447e86
- staramr was updated to 15a4fff208e4
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