On 2026-07-05, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #597

Population Genomics

• effective_population_size_ld_method was updated to 44df6bc11647
• genetic_format_conversion was updated to 5969c92b20e4
• population_genomics_split_vcf_by_pop was updated to 82d7b529bd9e
• population_genomics_vcf_filtering was updated to 53f9cb509272
• population_genomics_vcf_keep_remove_individuals was updated to c5227eed2880
• population_genomics_vcf_subset was updated to 0b9504c6e514

QIIME 2

• qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
• qiime2__deblur__denoise_16S was updated to b883cbea5623

RNA Analysis

• deseq2 was updated to b060944b3989
• eastr was updated to d2a78ce2b1f1
• tsenat was updated to 2ead6d1194e6

Convert Formats

• msconvert was updated to 252d185267fc
• geopandas_table2geojson was updated to 4f831247b7ae

Assembly

• instagraal was updated to 5c11b91a76dc

Graph/Display Data

• heatmap was updated to fe4ccc06e90e

Metagenomic Analysis

• mags_visualization_comp_conta was updated to 50ac19944038
• mags_visualization_drep_cluster_annot was updated to 042531998360
• mags_visualization_drep_cluster_func was updated to a70de587c7da
• mags_visualization_pathway_module_heatmap was updated to f729d5b6843a
• mags_visualization_sample_heatmap was updated to f9cd29b68158
• mags_visualization_taxa_sankey was updated to 2e995d7dba20

SAM/BAM

• samtools_faidx was updated to 78d6d62d4ce4

Single-cell

• sopa_aggregate was updated to 57d6f5624178
• sopa_patchify was updated to 4aff1aa800d6
• sopa_report was updated to 5d9c0d2ab65f
• sopa_resolve was updated to dce7456373c1
• sopa_segmentation was updated to b640b0abe4c6

Statistics

• clustering_from_distmat was updated to 10abfe22d9c6
• general_matrix_tool was updated to b33018c9262e

Variant Calling

• ssiamb was updated to 5a4d65354257

None

• data_manager_diamond_database_builder was updated to 4a08b7b76b78

Machine Learning

• image_learner was updated to 7d84cdd45c15