On 2024-08-18, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #470
Text Manipulation
- text_processing was updated to 86755160afbf
- filter_tabular was updated to 4d5aae46f850
Metabolomics
- biotransformer was updated to 6cd2a9e6ac49
- mfassignr_histnoise was updated to 5d99cb9755da
- mfassignr_isofiltr was updated to e4ddc3bc7e15
- mfassignr_kmdnoise was updated to 99d021734000
- mfassignr_mfassign was updated to 9cbbfd54d7c4
- mfassignr_mfassigncho was updated to db058392cb2e
- mfassignr_recal was updated to 13ef8b748af9
- mfassignr_recallist was updated to 7e5ccc8b6f6e
- mfassignr_snplot was updated to 7579b0cda787
- rcx_tk was updated to 54401f9d1a30
QIIME 2
- qiime2__deblur__denoise_16S was updated to 2572fc0f88f2
- qiime2__deblur__denoise_16S was updated to b883cbea5623
ChemicalToolBox
- openbabel_addh was updated to 7b6fd1c273cd
- openbabel_change_title was updated to 2cd8aee0d830
- openbabel_change_title was updated to a638d8d13bb3
- openbabel_compound_convert was updated to 4242b4d68e9c
- openbabel_filter was updated to 8ee975c49a3d
- openbabel_filter was updated to 988085c7a0ea
- openbabel_genprop was updated to 50eaae9df8d3
- openbabel_obgrep was updated to 985ab0acd514
- openbabel_remduplicates was updated to 12aca74f07d7
- openbabel_remduplicates was updated to c5de6c19eb06
- openbabel_remions was updated to f70b83b730ac
- openbabel_remove_protonation_state was updated to 22a866858b81
- openbabel_remsmall was updated to 81836d586797
- openbabel_spectrophore_search was updated to f5d7ffbb2d33
- openbabel_structure_distance_finder was updated to 49242402887b
- openbabel_structure_distance_finder was updated to 8302ab092300
- openbabel_subsearch was updated to 9adf3fae2771
- openbabel_svg_depiction was updated to 75ee9c410951
- prepare_ligands_for_docking was updated to a5f4b80e6769
- prepare_ligands_for_docking was updated to fac2c28b4c55
FASTA/FASTQ
- fastp was updated to d60c3f704da0
- pear was updated to 037f0acc7830
Variant Calling
- basil was updated to 77fc7640abc7
- bcftools_annotate was updated to 0f087051441e
- bcftools_call was updated to bf06b66ab5c2
- bcftools_cnv was updated to 6d35a3780bfd
- bcftools_cnv was updated to 75a85c76c9c6
- bcftools_concat was updated to 08296952d12f
- bcftools_concat was updated to 74303445f6bd
- bcftools_consensus was updated to 147de996e34f
- bcftools_consensus was updated to da0bf365652d
- bcftools_convert_from_vcf was updated to 04aa97fc125c
- bcftools_convert_to_vcf was updated to 2b3ce2abc747
- bcftools_csq was updated to 1da985043619
- bcftools_filter was updated to 656a916779fe
- bcftools_filter was updated to bc199fd136f8
- bcftools_gtcheck was updated to 0e9cc2520372
- bcftools_isec was updated to 57f36434474f
- bcftools_merge was updated to 7cb9d0f396c3
- bcftools_mpileup was updated to f59a4ab0e5b1
- bcftools_norm was updated to aaac3ed89508
- bcftools_plugin_color_chrs was updated to 36960e552ddc
- bcftools_plugin_color_chrs was updated to 51d28b4d3a04
- bcftools_plugin_frameshifts was updated to 399b40b2bcab
- bcftools_plugin_frameshifts was updated to abd806291372
- bcftools_plugin_setgt was updated to 262bba5b90ef
- bcftools_plugin_setgt was updated to 76609128aef7
- bcftools_plugin_split_vep was updated to d55feecb6dc1
- bcftools_plugin_split_vep was updated to e05d81ad3f93
- bcftools_query was updated to a850902cac64
- bcftools_query was updated to fc19c09a8beb
- bcftools_reheader was updated to 8057cf55fa41
- bcftools_reheader was updated to d453025d7e5d
- bcftools_roh was updated to 4d44109ae1f8
- bcftools_stats was updated to 999c1918479b
- bcftools_view was updated to 052eb3814f0f
Convert Formats
- msconvert was updated to ab6c14374bc0
Proteomics
- openms_openpepxl was updated to a2a842b00f9c
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
Machine Learning
- chatgpt_openai_api was updated to 08c658e9aa9e
Imaging
- cp_tile was updated to 878bafb411dd
Annotation
- microsatbed was updated to 3f6e5c701945
- roary was updated to 9b2b122d0415
None
- data_manager_diamond_database_builder was updated to 4a08b7b76b78
- data_manager_omamer was updated to f8d72275878e
Metagenomic Analysis
- ampvis2_alpha_diversity was updated to 61acf8a76396
- ampvis2_boxplot was updated to 874b1a4fe7f0
- ampvis2_core was updated to f360e09dd04b
- ampvis2_export_fasta was updated to 7c3fea31765c
- ampvis2_frequency was updated to ff9bc9357c89
- ampvis2_heatmap was updated to 0895b4ebcfc8
- ampvis2_load was updated to 91efbd7b52dc
- ampvis2_merge_ampvis2 was updated to a14326f1e7df
- ampvis2_mergereplicates was updated to 74ee43d45476
- ampvis2_octave was updated to a194e5f09106
- ampvis2_ordinate was updated to 46a85469c104
- ampvis2_otu_network was updated to 47aec96764b8
- ampvis2_rankabundance was updated to d1727ab06449
- ampvis2_rarecurve was updated to febf16487e02
- ampvis2_setmetadata was updated to 024a22e84bea
- ampvis2_subset_samples was updated to 317728cb0f8a
- ampvis2_subset_taxa was updated to adf75bf963f7
- ampvis2_timeseries was updated to 6121b061418a
- ampvis2_venn was updated to 6acf30f0d9fa
- bigscape was updated to 3447eb0ce896
- metaphlan was updated to 1a037928504c
Nanopore
- nanoplot was updated to a38bdcec9e4c
Phylogenetics
- hyphy_prime was updated to 4072360120e4
- pacu_map was updated to b1f16ffc171f
- pacu_snp was updated to 7ba3e44093c9
- picrust2_add_descriptions was updated to 2f47a294ef49
- picrust2_hsp was updated to 3b133b8d578a
- picrust2_metagenome_pipeline was updated to 709adbfcf308
- picrust2_pathway_pipeline was updated to f53beb324696
- picrust2_pipeline was updated to d6bb2e3febda
- picrust2_place_seqs was updated to 73b56418e7f4
- picrust2_shuffle_predictions was updated to 677f3c8db525
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